Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p32110 Brassica napus
Aa31LG8G4630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis
Actinidia02680 Actinidia chinensis
Actinidia04194 Actinidia chinensis
Actinidia34644 Actinidia chinensis
Ah.14g085900 Amaranthus hybridus
AL3G30880 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea
AT3G17712 Arabidopsis thaliana
AT3G17740 Arabidopsis thaliana
ATR0598G116 Amborella trichopoda
Atru.chr9.205 Acer truncatum
AUR62034018 Chenopodium quinoa
BcaC05g28760 Brassica carinata
BolC5t33600H Brassica oleracea
BraA05t22040Z Brassica rapa
C05p48600 Brassica napus
C05p48650 Brassica napus
CAN.G637.21 Capsicum annuum
CAN.G852.1 Capsicum annuum
CARHR093080 Cardamine hirsuta
Carub.0003s1747 Capsella rubella
Ca_05032_v3 Cicer arietinum L.
Ca_22760_v3 Cicer arietinum L.
Ca_23670_v3 Cicer arietinum L.
Ca_26696_v3 Cicer arietinum L.
CBR_g4862 Chara braunii
CBR_g57846 Chara braunii
Cc04_g09070 Coffea canephora
CDE07G1110 Ceratophyllum demersum
Ciclev10018592m.g Citrus clementina
CiPaw.15G150000 Carya illinoinensis
ClCG01G014910 Citrullus lanatus
COL.COLO4_09239 Corchorus olitorius
COL.COLO4_09240 Corchorus olitorius
Cpa.g.c41962 Carica papaya
Cpa.g.sc7.122 Carica papaya
Cpa.g.sc7.123 Carica papaya
Cpa.g.sc7.124 Carica papaya
Cre13.g589650 Chlamydomonas reinhardtii
CsaV3_1G007420 Cucumis sativus L.
CSS0030577 Camellia sinensis var. sinensis
CSS0040809 Camellia sinensis var. sinensis
DCAR_010206 Daucus carota
Dinv19314 Davidia involucrata
Duzib084G0934 Durio zibethinus
ECA238G1211 Erigeron canadensis
EL10Ac8g19491 Beta vulgaris
Eucgr.H00592 Eucalyptus grandis
FAN04G1871 Fragaria x ananassa
FAN08G1906 Fragaria x ananassa
FAN13G0246 Fragaria x ananassa
FAN18G4444 Fragaria x ananassa
FvH4_4g15351 Fragaria vesca
FvH4_5g17940 Fragaria vesca
Glyma.09G169600 Glycine max
Glyma.16G219200 Glycine max
Gohir.A03G090800 Gossypium hirsutum
Gohir.D02G118900 Gossypium hirsutum
Gorai.005G134900 Gossypium raimondii
GSVIVG01012939001 Vitis vinifera
HanXRQChr01g0002621 Helianthus annuus
Haze_18958 Corylus avellana
HPP92_002770 Vanilla planifolia
Lalb_Chr14g0370421 Lupinus albus
Lj2g0026336 Lotus japonicus
Lj9C414G14 Lonicera japonica
Lsat_1_v5_gn_2_15380 Lactuca sativa
Lsat_1_v5_gn_5_105340 Lactuca sativa
Manes.06G000900 Manihot esculenta
Mapoly0172s0015 Marchantia polymorpha
MD14G1242200 Malus domestica
Medtr4g016590 Medicago truncatula
Medtr6g072640 Medicago truncatula
Medtr6g074160 Medicago truncatula
Medtr6g074610 Medicago truncatula
Medtr6g074790 Medicago truncatula
Medtr6g075030 Medicago truncatula
Medtr6g472240 Medicago truncatula
MELO3C002158.2 Cucumis melo
Migut.O00235 Erythranthe guttata
MSTRG.23195 Avicennia marina
Nitab4.5_0001180g0010 Nicotiana tabacum
Nitab4.5_0005200g0040 Nicotiana tabacum
Nn4g24592 Nelumbo nucifera
Oeu060652.1 Olea europaea
Os02g0772500 Oryza sativa ssp. japonica
Peaxi162Scf00171g00631 Petunia axillaris
PGR083G1118 Punica granatum
Phvul.004G145200 Phaseolus vulgaris
Potri.015G033300 Populus trichocarpa
Pp3c9_1610 Physcomitrium patens
Pp3c9_1614 Physcomitrium patens
Prupe.5G239800 Prunus persica
Psat1g124600 Pisum sativum
PSO063G0294 Papaver somniferum
QL10p033145 Quercus lobata
RcHm_v2.0_Chr7g0177661 Rosa chinensis
Rhsim09G0028600 Rhododendron simsii
Sabra15G0027400 Salix brachista
SalBow5G5149 Salvia bowleyana
SalBow5G5312 Salvia bowleyana
Sc10g0008940 Simmondsia chinensis
Sc10g0008950 Simmondsia chinensis
Sed0020457 Sechium edule
SEGI_33145 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29654 Striga asiatica
SGA_v2.0_scaffold90G27777 Striga asiatica
SHI19119 Sapria himalayana
SMO340G0100 Selaginella moellendorffii
Solyc03g098160.3 Solanum lycopersicum
Sopen03g028860 Solanum pennellii
Sp3g15860 Schrenkiella parvula
TAR629G0371 Trochodendron aralioides
THA.LOC104821822 Tarenaya hassleriana
Thecc.02G342000 Theobroma cacao
Thecc.03G067700 Theobroma cacao
Thhalv10019937m.g Eutrema salsugineum
TPR.G28992 Trifolium pratense
TWI81G1078 Tripterygium wilfordii
unitig_22.g5442 Utricularia gibba
vmacro22676 Vaccinium macrocarpon
VMungo0464G0980 Vigna mungo
Zm00001eb256430 Zea mays

User provided reference genes

Program Settings