Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p13560 Brassica napus
Aa31LG7G2500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis
Actinidia21757 Actinidia chinensis
Ah.15g094170 Amaranthus hybridus
AL1G29990 Arabidopsis lyrata
Aqoxy7G01215 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.24L57E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5QEE3F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GTSR33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea
AT1G17665 Arabidopsis thaliana
ATR0026G017 Amborella trichopoda
BcaB07g34023 Brassica carinata
BcaC05g25688 Brassica carinata
BolC5t30308H Brassica oleracea
BraA06t24508Z Brassica rapa
C05p16080 Brassica napus
CAN.G1389.16 Capsicum annuum
CANSAT56G1450 Cannabis sativa
CARHR018270 Cardamine hirsuta
Carub.0001s1740 Capsella rubella
Ca_28052_v3 Cicer arietinum L.
Ca_30533_v3 Cicer arietinum L.
Cc04_g01980 Coffea canephora
CDE04G2687 Ceratophyllum demersum
CDE06G2767 Ceratophyllum demersum
Ciclev10025783m.g Citrus clementina
CiPaw.01G225300 Carya illinoinensis
CiPaw.02G140400 Carya illinoinensis
ClCG09G000650 Citrullus lanatus
COL.COLO4_30656 Corchorus olitorius
Cpa.g.sc25.55 Carica papaya
Cpa.g.sc25.56 Carica papaya
CsaV3_7G034830 Cucumis sativus L.
CSS0019345 Camellia sinensis var. sinensis
CSS0024626 Camellia sinensis var. sinensis
DCAR_007620 Daucus carota
Dinv30382 Davidia involucrata
Dinv37916 Davidia involucrata
Duzib160G0060 Durio zibethinus
Duzib192G0510 Durio zibethinus
Duzib235G0903 Durio zibethinus
FAN02G1261 Fragaria x ananassa
FAN05G1138 Fragaria x ananassa
FAN09G0301 Fragaria x ananassa
FAN14G0371 Fragaria x ananassa
FvH4_6g33270 Fragaria vesca
Glyma.13G350600 Glycine max
Glyma.15G023900 Glycine max
Gohir.A02G115200 Gossypium hirsutum
Gohir.A10G059500 Gossypium hirsutum
Gohir.D03G056300 Gossypium hirsutum
Gohir.D10G061000 Gossypium hirsutum
Gorai.003G059300 Gossypium raimondii
Gorai.011G065200 Gossypium raimondii
GSVIVG01016850001 Vitis vinifera
HanXRQChr09g0276431 Helianthus annuus
Haze_02796 Corylus avellana
Haze_15947 Corylus avellana
HPP92_003967 Vanilla planifolia
Hund20857 Selenicereus undatus
Lalb_Chr24g0396361 Lupinus albus
Lj3g0013508 Lotus japonicus
Lj9P518T56 Lonicera japonica
Lsat_1_v5_gn_4_95241 Lactuca sativa
Manes.04G139300 Manihot esculenta
Manes.11G026800 Manihot esculenta
Mapoly0001s0383 Marchantia polymorpha
MBI01_g01269_MAGBIO Magnolia biondii
MBI04_g34125_MAGBIO Magnolia biondii
MBI06_g20962_MAGBIO Magnolia biondii
MBI09_g03017_MAGBIO Magnolia biondii
MD17G1174400 Malus domestica
Medtr2g100100 Medicago truncatula
Medtr8g016260 Medicago truncatula
MELO3C024394.2 Cucumis melo
Migut.I01022 Erythranthe guttata
MSTRG.10986 Avicennia marina
Nitab4.5_0001295g0030 Nicotiana tabacum
Nitab4.5_0007429g0010 Nicotiana tabacum
Nn6g35476 Nelumbo nucifera
Nn8g38867 Nelumbo nucifera
Oeu007005.1 Olea europaea
Oeu039964.1 Olea europaea
Os01g0197350 Oryza sativa ssp. japonica
Os01g0197400 Oryza sativa ssp. japonica
Peaxi162Scf00038g01529 Petunia axillaris
PGR102G2043 Punica granatum
PGR102G2710 Punica granatum
PGSC0003DMG400002589 Solanum tuberosum
Phvul.005G159900 Phaseolus vulgaris
Potri.003G038600 Populus trichocarpa
Pp3c7_7340 Physcomitrium patens
Prupe.3G050100 Prunus persica
Psat4g199680 Pisum sativum
PSO210G0359 Papaver somniferum
PSO210G2046 Papaver somniferum
QL05p012743 Quercus lobata
RcHm_v2.0_Chr2g0142971 Rosa chinensis
Rhsim08G0233100 Rhododendron simsii
Sabra03G0025100 Salix brachista
SalBow6G0902 Salvia bowleyana
Sc15g0000130 Simmondsia chinensis
Sed0006903 Sechium edule
SGA_v2.0_scaffold127G34049 Striga asiatica
Solyc03g121560.3 Solanum lycopersicum
Sopen03g040370 Solanum pennellii
Sp1g15770 Schrenkiella parvula
TAR383G0464 Trochodendron aralioides
TAR624G0799 Trochodendron aralioides
TAR636G0696 Trochodendron aralioides
THA.LOC104812213 Tarenaya hassleriana
Thecc.06G111200 Theobroma cacao
Thhalv10008108m.g Eutrema salsugineum
TPR.G6530 Trifolium pratense
TPR.G7922 Trifolium pratense
TPR.G8429 Trifolium pratense
vmacro18787 Vaccinium macrocarpon
VMungo1080G1020 Vigna mungo
Zm00001eb337890 Zea mays

User provided reference genes

Program Settings