Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28210 Brassica napus
Aa31LG5G22130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis
Actinidia08768 Actinidia chinensis
Actinidia28907 Actinidia chinensis
Ah.08g211590 Amaranthus hybridus
AL4G33120 Arabidopsis lyrata
Aqoxy1G01145 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea
AT2G36895 Arabidopsis thaliana
ATR0219G012 Amborella trichopoda
Atru.BG.206.p Acer truncatum
Atru.chr8.1795 Acer truncatum
AUR62040336 Chenopodium quinoa
AUR62042070 Chenopodium quinoa
AUR62042510 Chenopodium quinoa
AUR62044331 Chenopodium quinoa
BcaB01g03809 Brassica carinata
BcaB06g28958 Brassica carinata
BcaC02g07569 Brassica carinata
BcaC02g07570 Brassica carinata
BcaC02g07571 Brassica carinata
BcaC04g19302 Brassica carinata
BolC4t28046H Brassica oleracea
BraA04t18305Z Brassica rapa
C04p65570 Brassica napus
CANSAT80G2892 Cannabis sativa
CARHR131360 Cardamine hirsuta
Carub.0004s1875 Capsella rubella
Ca_11509_v3 Cicer arietinum L.
Ca_27221_v3 Cicer arietinum L.
CBR_g45378 Chara braunii
Cc06_g04290 Coffea canephora
CDE03G0133 Ceratophyllum demersum
CDE04G2630 Ceratophyllum demersum
Cfa017623 Carpinus fangiana
Ciclev10012651m.g Citrus clementina
CiPaw.09G171800 Carya illinoinensis
ClCG10G020070 Citrullus lanatus
COL.COLO4_26951 Corchorus olitorius
Cpa.g.sc102.32 Carica papaya
Cre11.g469100 Chlamydomonas reinhardtii
CsaV3_3G036020 Cucumis sativus L.
CSS0011355 Camellia sinensis var. sinensis
CSS0035285 Camellia sinensis var. sinensis
DCAR_017674 Daucus carota
Dinv15300 Davidia involucrata
Dinv35789 Davidia involucrata
Duzib093G1320 Durio zibethinus
Duzib106G2039 Durio zibethinus
ECA248G3050 Erigeron canadensis
EL10Ac7g16640 Beta vulgaris
Eucgr.K02926 Eucalyptus grandis
FAN02G1782 Fragaria x ananassa
FAN05G1999 Fragaria x ananassa
FAN05G2800 Fragaria x ananassa
FAN09G1272 Fragaria x ananassa
FAN14G4061 Fragaria x ananassa
FvH4_6g16470 Fragaria vesca
Glyma.10G054900 Glycine max
Glyma.13G142000 Glycine max
Gohir.A01G141763 Gossypium hirsutum
Gohir.D01G130400 Gossypium hirsutum
Gorai.002G161800 Gossypium raimondii
GSVIVG01033647001 Vitis vinifera
HanXRQChr11g0350481 Helianthus annuus
Haze_20529 Corylus avellana
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla
HPP92_022584 Vanilla planifolia
Lalb_Chr21g0315031 Lupinus albus
Lj2A120T46 Lonicera japonica
Lj4g0025039 Lotus japonicus
Lsat_1_v5_gn_1_51681 Lactuca sativa
Manes.08G011200 Manihot esculenta
Mapoly0063s0087 Marchantia polymorpha
MBI18_g02636_MAGBIO Magnolia biondii
MD04G1092500 Malus domestica
MD12G1110600 Malus domestica
Medtr1g063100 Medicago truncatula
Medtr6g035275 Medicago truncatula
Migut.J00651 Erythranthe guttata
Nitab4.5_0000063g0130 Nicotiana tabacum
Nitab4.5_0000814g0050 Nicotiana tabacum
Nn6g35281 Nelumbo nucifera
Oeu053684.1 Olea europaea
Os03g0152600 Oryza sativa ssp. japonica
Peaxi162Scf00311g01110 Petunia axillaris
PGR142G1273 Punica granatum
PGSC0003DMG400028288 Solanum tuberosum
Phvul.007G147500 Phaseolus vulgaris
Potri.016G099300 Populus trichocarpa
Pp3c6_17550 Physcomitrium patens
Prupe.4G234300 Prunus persica
Prupe.7G128900 Prunus persica
Psat6g073640 Pisum sativum
PSO063G5537 Papaver somniferum
PSO339G0145 Papaver somniferum
QL07p043135 Quercus lobata
RcHm_v2.0_Chr3g0470361 Rosa chinensis
Rhsim03G0091000 Rhododendron simsii
Sabra16G0098900 Salix brachista
Sc20g0005540 Simmondsia chinensis
Sed0010557 Sechium edule
SEGI_37587 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15525 Striga asiatica
SMO119G0246 Selaginella moellendorffii
Solyc10g083990.2 Solanum lycopersicum
Sopen10g033440 Solanum pennellii
Sp4g19190 Schrenkiella parvula
TAR623G0635 Trochodendron aralioides
THA.LOC104805233 Tarenaya hassleriana
THA.LOC104807061 Tarenaya hassleriana
Thecc.05G068100 Theobroma cacao
Thhalv10000465m.g Eutrema salsugineum
Thhalv10017183m.g Eutrema salsugineum
TPR.G11270 Trifolium pratense
TWI53G1706 Tripterygium wilfordii
TWI77G0409 Tripterygium wilfordii
unitig_26.g9234 Utricularia gibba
unitig_26.g9235 Utricularia gibba
vmacro07297 Vaccinium macrocarpon
VMungo0720G2332 Vigna mungo
Zm00001eb403160 Zea mays

User provided reference genes

Program Settings