Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13040 Brassica napus
A03p52890 Brassica napus
Aa31LG6G3700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis
Actinidia07582 Actinidia chinensis
Actinidia25618 Actinidia chinensis
AL7G32220 Arabidopsis lyrata
Aqoxy1G02520 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea
AT4G21720 Arabidopsis thaliana
ATR0680G190 Amborella trichopoda
Atru.chr10.1908 Acer truncatum
AUR62014802 Chenopodium quinoa
AUR62016993 Chenopodium quinoa
BcaC06g30674 Brassica carinata
BcaC09g51212 Brassica carinata
BcaNung00839 Brassica carinata
BcaNung00841 Brassica carinata
BcaNung02241 Brassica carinata
BolC1t01524H Brassica oleracea
BolC7t45633H Brassica oleracea
BraA01t01246Z Brassica rapa
BraA03t14365Z Brassica rapa
C01p15710 Brassica napus
C07p51340 Brassica napus
CAN.G1164.13 Capsicum annuum
CANSAT35G0041 Cannabis sativa
CARHR228450 Cardamine hirsuta
Carub.0007s1968 Capsella rubella
Ca_18536_v3 Cicer arietinum L.
Cc02_g13190 Coffea canephora
CDE04G3708 Ceratophyllum demersum
Cfa000430 Carpinus fangiana
Ciclev10017521m.g Citrus clementina
CiPaw.09G058300 Carya illinoinensis
CiPaw.10G047400 Carya illinoinensis
ClCG00G005210 Citrullus lanatus
ClCG01G022900 Citrullus lanatus
Cpa.g.sc27.57 Carica papaya
CsaV3_6G050070 Cucumis sativus L.
CSS0006104 Camellia sinensis var. sinensis
CSS0025334 Camellia sinensis var. sinensis
DCAR_018474 Daucus carota
Dinv07546 Davidia involucrata
Duzib160G0870 Durio zibethinus
Duzib235G1545 Durio zibethinus
ECA247G1807 Erigeron canadensis
EL10Ac8g20365 Beta vulgaris
Eucgr.D00634 Eucalyptus grandis
FAN08G1739 Fragaria x ananassa
FAN11G0154 Fragaria x ananassa
FAN18G2724 Fragaria x ananassa
FAN21G3093 Fragaria x ananassa
FvH4_3g09420 Fragaria vesca
FvH4_5g20990 Fragaria vesca
Glyma.07G195600 Glycine max
Glyma.13G180700 Glycine max
Gohir.A06G126500 Gossypium hirsutum
Gohir.D06G131300 Gossypium hirsutum
Gorai.010G153200 Gossypium raimondii
GSVIVG01002932001 Vitis vinifera
GSVIVG01006537001 Vitis vinifera
HanXRQChr01g0003901 Helianthus annuus
Haze_06487 Corylus avellana
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla
HPP92_014805 Vanilla planifolia
Hund21232 Selenicereus undatus
Lalb_Chr16g0383701 Lupinus albus
Lj2A287T56 Lonicera japonica
Lj6g0008813 Lotus japonicus
Lsat_1_v5_gn_1_126121 Lactuca sativa
Manes.16G026200 Manihot esculenta
MBI18_g17001_MAGBIO Magnolia biondii
MD05G1314200 Malus domestica
MD10G1295500 Malus domestica
Medtr4g088930 Medicago truncatula
MELO3C007289.2 Cucumis melo
Migut.H01493 Erythranthe guttata
Migut.M01153 Erythranthe guttata
MSTRG.15892 Avicennia marina
Nitab4.5_0002158g0020 Nicotiana tabacum
Nitab4.5_0003942g0060 Nicotiana tabacum
Nitab4.5_0005954g0020 Nicotiana tabacum
Nitab4.5_0013250g0030 Nicotiana tabacum
Nn1g04048 Nelumbo nucifera
Nn1g06589 Nelumbo nucifera
Oeu005074.1 Olea europaea
Os04g0680300 Oryza sativa ssp. japonica
Peaxi162Scf00530g00219 Petunia axillaris
Peaxi162Scf00736g00313 Petunia axillaris
PGR004G1731 Punica granatum
PGSC0003DMG400022442 Solanum tuberosum
PGSC0003DMG400022813 Solanum tuberosum
Phvul.002G228000 Phaseolus vulgaris
Phvul.006G187000 Phaseolus vulgaris
Potri.004G041700 Populus trichocarpa
Prupe.4G044900 Prunus persica
Psat7g112640 Pisum sativum
PSO541G0808 Papaver somniferum
PSO675G2929 Papaver somniferum
QL05p039836 Quercus lobata
RcHm_v2.0_Chr5g0008131 Rosa chinensis
Rhsim13G0176800 Rhododendron simsii
Sabra04G0025800 Salix brachista
Sabra11G0035100 Salix brachista
SalBow7G3743 Salvia bowleyana
Sc05g0007770 Simmondsia chinensis
Sed0007841 Sechium edule
Sed0020533 Sechium edule
SEGI_22799 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18290 Striga asiatica
Solyc02g078430.3 Solanum lycopersicum
Solyc10g009040.4 Solanum lycopersicum
Sopen02g023280 Solanum pennellii
Sopen10g004820 Solanum pennellii
Sp7g19880 Schrenkiella parvula
THA.LOC104812881 Tarenaya hassleriana
Thecc.06G189800 Theobroma cacao
Thhalv10026538m.g Eutrema salsugineum
TPR.G12044 Trifolium pratense
TWI38G1090 Tripterygium wilfordii
unitig_22.g6746 Utricularia gibba
VMungo0251G3500 Vigna mungo
VMungo0540G1954 Vigna mungo
Zm00001eb065930 Zea mays

User provided reference genes

Program Settings