Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p04460 Brassica napus
A09p11050 Brassica napus
Aa31LG8G13900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis
Actinidia00600 Actinidia chinensis
Ah.01g009070 Amaranthus hybridus
Ah.01g022670 Amaranthus hybridus
Ah.13g070010 Amaranthus hybridus
AL3G49260 Arabidopsis lyrata
Aqoxy1G01171 Aquilegia oxysepala
Aqoxy5G00988 Aquilegia oxysepala
Aqoxy6G00177 Aquilegia oxysepala
AT2G16630 Arabidopsis thaliana
ATR0810G191 Amborella trichopoda
AUR62010081 Chenopodium quinoa
AUR62013075 Chenopodium quinoa
BcaB03g16385 Brassica carinata
BcaB07g31757 Brassica carinata
BcaC04g23011 Brassica carinata
BcaC06g36161 Brassica carinata
BolC7t41128H Brassica oleracea
BolC9t54199H Brassica oleracea
BraA07t28238Z Brassica rapa
BraA09t36749Z Brassica rapa
C07p07090 Brassica napus
C09p13060 Brassica napus
CAN.G588.32 Capsicum annuum
CANSAT25G1913 Cannabis sativa
CARHR106850 Cardamine hirsuta
Carub.0003s3038 Capsella rubella
Ca_15314_v3 Cicer arietinum L.
Cc02_g16450 Coffea canephora
CDE05G1002 Ceratophyllum demersum
Cfa005191 Carpinus fangiana
Ciclev10028711m.g Citrus clementina
CiPaw.05G077900 Carya illinoinensis
ClCG02G011620 Citrullus lanatus
COL.COLO4_17266 Corchorus olitorius
Cpa.g.sc37.182 Carica papaya
CsaV3_2G015780 Cucumis sativus L.
CSS0030950 Camellia sinensis var. sinensis
DCAR_003705 Daucus carota
Dinv04963 Davidia involucrata
Dinv41970 Davidia involucrata
Duzib132G0283 Durio zibethinus
EL10Ac9g21428 Beta vulgaris
Eucgr.G01761 Eucalyptus grandis
FAN15G0431 Fragaria x ananassa
FAN20G1949 Fragaria x ananassa
FAN24G1019 Fragaria x ananassa
FAN27G2989 Fragaria x ananassa
FvH4_2g01740 Fragaria vesca
Glyma.04G005100 Glycine max
Glyma.06G004900 Glycine max
Gohir.1Z049391 Gossypium hirsutum
Gohir.A01G164300 Gossypium hirsutum
Gohir.D01G156200 Gossypium hirsutum
Gorai.002G193700 Gossypium raimondii
GSVIVG01024071001 Vitis vinifera
HanXRQChr10g0298941 Helianthus annuus
HanXRQChr17g0557851 Helianthus annuus
Haze_02189 Corylus avellana
HPP92_013009 Vanilla planifolia
Hund06410 Selenicereus undatus
Lalb_Chr23g0265081 Lupinus albus
Lj1g0023631 Lotus japonicus
Lj5C183T16 Lonicera japonica
Lsat_1_v5_gn_8_126000 Lactuca sativa
Manes.11G090800 Manihot esculenta
Mapoly0014s0128 Marchantia polymorpha
MBI05_g07501_MAGBIO Magnolia biondii
MBI05_g21530_MAGBIO Magnolia biondii
MBI05_g30117_MAGBIO Magnolia biondii
MBI05_g31848_MAGBIO Magnolia biondii
MBI05_g47219_MAGBIO Magnolia biondii
MBI05_g48109_MAGBIO Magnolia biondii
MD05G1116900 Malus domestica
MD10G1120000 Malus domestica
MD10G1120100 Malus domestica
Medtr3g117760 Medicago truncatula
MELO3C020791.2 Cucumis melo
Migut.B00115 Erythranthe guttata
MSTRG.16884 Avicennia marina
MSTRG.20014 Avicennia marina
Nn1g05912 Nelumbo nucifera
Nn5g29105 Nelumbo nucifera
Oeu014457.2 Olea europaea
Oeu060421.1 Olea europaea
Os02g0101900 Oryza sativa ssp. japonica
PGR042G0330 Punica granatum
PGSC0003DMG400001627 Solanum tuberosum
Phvul.009G025500 Phaseolus vulgaris
Potri.004G169200 Populus trichocarpa
Pp3c14_8250 Physcomitrium patens
Pp3c1_27500 Physcomitrium patens
Prupe.8G161400 Prunus persica
Psat5g003040 Pisum sativum
PSO170G2363 Papaver somniferum
PSO700G0292 Papaver somniferum
QL11p047722 Quercus lobata
RcHm_v2.0_Chr6g0244771 Rosa chinensis
Rhsim11G0188500 Rhododendron simsii
Rhsim11G0188600 Rhododendron simsii
Sc14g0002130 Simmondsia chinensis
Sed0004865 Sechium edule
SEGI_14996 Sequoiadendron giganteum
SEGI_19356 Sequoiadendron giganteum
SEGI_23181 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13265 Striga asiatica
SGA_v2.0_scaffold9G04828 Striga asiatica
SMO223G0025 Selaginella moellendorffii
Sopen01g053260 Solanum pennellii
Sp3g30120 Schrenkiella parvula
TAR376G0811 Trochodendron aralioides
TAR536G0014 Trochodendron aralioides
TAR628G0693 Trochodendron aralioides
THA.LOC104804336 Tarenaya hassleriana
Thecc.02G066200 Theobroma cacao
Thhalv10022734m.g Eutrema salsugineum
TPR.G38570 Trifolium pratense
TWI31G0553 Tripterygium wilfordii
unitig_0.g43 Utricularia gibba
unitig_0.g827 Utricularia gibba
vmacro02255 Vaccinium macrocarpon
VMungo1309G1166 Vigna mungo
Zm00001eb210030 Zea mays

User provided reference genes

Program Settings