Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26770 Brassica napus
A05p10540 Brassica napus
Aa31LG9G15250 Aethionema arabicum
Actinidia25963 Actinidia chinensis
Ah.07g200350 Amaranthus hybridus
AL4G31240 Arabidopsis lyrata
Aqoxy3G02346 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.46AG3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92QZ6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0PZ9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RC41H8 Arachis hypogaea
AT2G35215 Arabidopsis thaliana
Atru.chr6.1708 Acer truncatum
BcaB02g09469 Brassica carinata
BcaB06g28832 Brassica carinata
BcaC02g07728 Brassica carinata
BcaC02g11625 Brassica carinata
BolC4t22939H Brassica oleracea
BolC4t22949H Brassica oleracea
BolC4t27900H Brassica oleracea
BraA04t18181Z Brassica rapa
BraA05t19992Z Brassica rapa
C04p12960 Brassica napus
C04p64170 Brassica napus
CANSAT21G1416 Cannabis sativa
CARHR129380 Cardamine hirsuta
Carub.0004s1692 Capsella rubella
Ca_06080_v3 Cicer arietinum L.
Cc08_g02780 Coffea canephora
Cfa012441 Carpinus fangiana
Ciclev10013401m.g Citrus clementina
CiPaw.11G093500 Carya illinoinensis
CiPaw.12G063900 Carya illinoinensis
ClCG10G001600 Citrullus lanatus
COL.COLO4_17031 Corchorus olitorius
Cpa.g.sc1778.1 Carica papaya
CsaV3_3G001720 Cucumis sativus L.
CsaV3_3G049160 Cucumis sativus L.
CSS0025259 Camellia sinensis var. sinensis
CSS0029921 Camellia sinensis var. sinensis
CSS0047178 Camellia sinensis var. sinensis
DCAR_005630 Daucus carota
Duzib068G0707 Durio zibethinus
Duzib205G0138 Durio zibethinus
EL10Ac5g12118 Beta vulgaris
Eucgr.D02199 Eucalyptus grandis
Eucgr.E00278 Eucalyptus grandis
FAN04G1003 Fragaria x ananassa
FAN08G0524 Fragaria x ananassa
FAN13G0922 Fragaria x ananassa
FAN18G1495 Fragaria x ananassa
FvH4_5g22090 Fragaria vesca
Glyma.01G018500 Glycine max
Glyma.03G113900 Glycine max
Glyma.07G112800 Glycine max
Glyma.09G204400 Glycine max
Gohir.A03G000800 Gossypium hirsutum
Gohir.A08G156500 Gossypium hirsutum
Gohir.A09G201400 Gossypium hirsutum
Gohir.A12G208300 Gossypium hirsutum
Gohir.D03G171400 Gossypium hirsutum
Gohir.D08G177000 Gossypium hirsutum
Gohir.D09G193100 Gossypium hirsutum
Gohir.D12G210900 Gossypium hirsutum
Gorai.003G182000 Gossypium raimondii
Gorai.004G184900 Gossypium raimondii
Gorai.006G216600 Gossypium raimondii
Gorai.008G226400 Gossypium raimondii
Haze_08227 Corylus avellana
Hma1.2p1_1063F.1_g253570 Hydrangea macrophylla
Hma1.2p1_2704F.1_g327130 Hydrangea macrophylla
HPP92_025449 Vanilla planifolia
Lalb_Chr05g0216081 Lupinus albus
Lalb_Chr09g0325661 Lupinus albus
Lalb_Chr09g0334701 Lupinus albus
Lalb_Chr16g0381361 Lupinus albus
Lj2g0014920 Lotus japonicus
Lj4g0026533 Lotus japonicus
Manes.15G181600 Manihot esculenta
MD16G1274300 Malus domestica
Medtr5g030470 Medicago truncatula
Medtr8g067270 Medicago truncatula
MELO3C013852.2 Cucumis melo
Migut.A01008 Erythranthe guttata
MSTRG.12158 Avicennia marina
Nn1g08042 Nelumbo nucifera
Nn6g33587 Nelumbo nucifera
Oeu017028.1 Olea europaea
Peaxi162Scf00045g00010 Petunia axillaris
Peaxi162Scf00460g00032 Petunia axillaris
PGR031G2877 Punica granatum
PGSC0003DMG400001160 Solanum tuberosum
Phvul.002G141600 Phaseolus vulgaris
Phvul.010G051800 Phaseolus vulgaris
Potri.001G142250 Populus trichocarpa
Potri.003G092100 Populus trichocarpa
Prupe.5G036400 Prunus persica
Psat2g135960 Pisum sativum
Psat4g118000 Pisum sativum
QL12p005176 Quercus lobata
RcHm_v2.0_Chr7g0209741 Rosa chinensis
Rhsim07G0127000 Rhododendron simsii
Rhsim11G0014800 Rhododendron simsii
Sabra01G0110900 Salix brachista
SalBow6G3663 Salvia bowleyana
Sc01g0007420 Simmondsia chinensis
Sc07g0008700 Simmondsia chinensis
Sed0015746 Sechium edule
SGA_v2.0_scaffold198G41102 Striga asiatica
SGA_v2.0_scaffold6G03157 Striga asiatica
Solyc08g005040.1 Solanum lycopersicum
Solyc08g076940.1 Solanum lycopersicum
Sopen06g021400 Solanum pennellii
Sopen08g001060 Solanum pennellii
Sopen08g025520 Solanum pennellii
Sp4g17440 Schrenkiella parvula
TAR636G3028 Trochodendron aralioides
THA.LOC104814444 Tarenaya hassleriana
Thecc.03G227700 Theobroma cacao
Thhalv10017673m.g Eutrema salsugineum
TPR.G28248 Trifolium pratense
TPR.G3912 Trifolium pratense
TWI60G0215 Tripterygium wilfordii
TWI81G0365 Tripterygium wilfordii
unitig_32.g10895 Utricularia gibba
vmacro00329 Vaccinium macrocarpon
VMungo1215G0846 Vigna mungo

User provided reference genes

Program Settings