Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16050 Brassica napus
Aa31LG8G11030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis
Actinidia02463 Actinidia chinensis
Actinidia02472 Actinidia chinensis
Actinidia07563 Actinidia chinensis
Actinidia38532 Actinidia chinensis
Ah.10g032820 Amaranthus hybridus
AL3G44130 Arabidopsis lyrata
Aqoxy7G02914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea
AT2G07340 Arabidopsis thaliana
ATR0580G035 Amborella trichopoda
Atru.BG.15.p Acer truncatum
AUR62020734 Chenopodium quinoa
AUR62027977 Chenopodium quinoa
BcaB01g04158 Brassica carinata
BcaB08g35517 Brassica carinata
BcaC01g06135 Brassica carinata
BcaC04g20645 Brassica carinata
BolC3t14280H Brassica oleracea
BolC3t14281H Brassica oleracea
BolC9t56988H Brassica oleracea
BraA03t10896Z Brassica rapa
C03p18890 Brassica napus
C09p41100 Brassica napus
CAN.G54.10 Capsicum annuum
CANSAT56G1353 Cannabis sativa
CANSAT56G3141 Cannabis sativa
CARHR104040 Cardamine hirsuta
Carub.0013s0004 Capsella rubella
Ca_23954_v3 Cicer arietinum L.
Ca_23960_v3 Cicer arietinum L.
CBR_g16047 Chara braunii
Cc06_g23850 Coffea canephora
CDE02G3570 Ceratophyllum demersum
CDE06G0918 Ceratophyllum demersum
CDE06G1428 Ceratophyllum demersum
Ciclev10009894m.g Citrus clementina
CiPaw.16G104700 Carya illinoinensis
ClCG11G011210 Citrullus lanatus
COL.COLO4_05650 Corchorus olitorius
Cpa.g.sc91.61 Carica papaya
Cre09.g405400 Chlamydomonas reinhardtii
CsaV3_2G009230 Cucumis sativus L.
CSS0003994 Camellia sinensis var. sinensis
CSS0013846 Camellia sinensis var. sinensis
CSS0029803 Camellia sinensis var. sinensis
DCAR_020455 Daucus carota
Dinv12620 Davidia involucrata
Dinv26485 Davidia involucrata
Duzib128G1629 Durio zibethinus
Duzib128G2031 Durio zibethinus
ECA234G1508 Erigeron canadensis
EL10Ac2g03616 Beta vulgaris
Eucgr.G00957 Eucalyptus grandis
FAN07G2657 Fragaria x ananassa
FAN12G2114 Fragaria x ananassa
FAN22G0966 Fragaria x ananassa
FvH4_4g05950 Fragaria vesca
Glyma.13G197100 Glycine max
Glyma.15G235500 Glycine max
Gohir.A05G286200 Gossypium hirsutum
Gohir.D05G287200 Gossypium hirsutum
Gorai.009G302200 Gossypium raimondii
GSVIVG01032270001 Vitis vinifera
HanXRQChr10g0309491 Helianthus annuus
HanXRQChr12g0358571 Helianthus annuus
Haze_18819 Corylus avellana
HPP92_021942 Vanilla planifolia
HPP92_021968 Vanilla planifolia
Hund19355 Selenicereus undatus
Lalb_Chr01g0007741 Lupinus albus
Lj3g0009914 Lotus japonicus
Lsat_1_v5_gn_5_80980 Lactuca sativa
Manes.02G198400 Manihot esculenta
Mapoly0027s0144 Marchantia polymorpha
MBI16_g09344_MAGBIO Magnolia biondii
MCO11G208 Micromonas commoda
MD13G1231800 Malus domestica
MD16G1236600 Malus domestica
Medtr8g039140 Medicago truncatula
MELO3C003910.2 Cucumis melo
Migut.L01922 Erythranthe guttata
MSTRG.10473 Avicennia marina
Nitab4.5_0000170g0080 Nicotiana tabacum
Nitab4.5_0002603g0030 Nicotiana tabacum
Nitab4.5_0003139g0110 Nicotiana tabacum
Nn8g40626 Nelumbo nucifera
Oeu028819.1 Olea europaea
Os02g0462900 Oryza sativa ssp. japonica
Peaxi162Scf00474g00519 Petunia axillaris
PGR044G0028 Punica granatum
PGSC0003DMG400013569 Solanum tuberosum
Phvul.011G206700 Phaseolus vulgaris
Potri.006G079700 Populus trichocarpa
Potri.018G149200 Populus trichocarpa
Pp3c19_4350 Physcomitrium patens
PRCOL_00006384 Prasinoderma coloniale
Prupe.1G063000 Prunus persica
Psat0s418g0040 Pisum sativum
PSO063G7114 Papaver somniferum
PSO170G1648 Papaver somniferum
RcHm_v2.0_Chr4g0397141 Rosa chinensis
Rhsim01G0107900 Rhododendron simsii
Sabra06G0060300 Salix brachista
SalBow3G3584 Salvia bowleyana
Sc23g0004310 Simmondsia chinensis
Sed0008839 Sechium edule
SEGI_05817 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09601 Striga asiatica
SMO200G0161 Selaginella moellendorffii
Solyc07g042620.4 Solanum lycopersicum
Sopen07g022310 Solanum pennellii
Sp6g13890 Schrenkiella parvula
TAR362G0416 Trochodendron aralioides
THA.LOC104826574 Tarenaya hassleriana
Thecc.10G119800 Theobroma cacao
Thhalv10015026m.g Eutrema salsugineum
TPR.G27823 Trifolium pratense
TWI32G0019 Tripterygium wilfordii
TWI63G0490 Tripterygium wilfordii
unitig_8.g3543 Utricularia gibba
vmacro20755 Vaccinium macrocarpon
VMungo1127G1563 Vigna mungo
Zm00001eb240760 Zea mays

User provided reference genes

Program Settings