Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p09720 Brassica napus
Aa31sc908G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis
Actinidia03097 Actinidia chinensis
Actinidia13543 Actinidia chinensis
Actinidia14215 Actinidia chinensis
Actinidia25052 Actinidia chinensis
Ah.13g067810 Amaranthus hybridus
Ah.14g078790 Amaranthus hybridus
AL8G26180 Arabidopsis lyrata
Aqoxy7G00487 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea
AT5G51880 Arabidopsis thaliana
ATR0757G128 Amborella trichopoda
Atru.chr1.554 Acer truncatum
AUR62016058 Chenopodium quinoa
AUR62021266 Chenopodium quinoa
BcaB08g35541 Brassica carinata
BcaC04g20627 Brassica carinata
BolC9t57014H Brassica oleracea
BraA10t43052Z Brassica rapa
C09p41380 Brassica napus
CAN.G1097.8 Capsicum annuum
CANSAT25G1059 Cannabis sativa
CARHR264780 Cardamine hirsuta
CARHR264790 Cardamine hirsuta
Carub.0008s1192 Capsella rubella
Ca_10810_v3 Cicer arietinum L.
Cc02_g03560 Coffea canephora
CDE12G0688 Ceratophyllum demersum
Cfa008258 Carpinus fangiana
Cfa025685 Carpinus fangiana
Ciclev10005723m.g Citrus clementina
CiPaw.03G100700 Carya illinoinensis
CiPaw.15G075500 Carya illinoinensis
ClCG05G007720 Citrullus lanatus
COL.COLO4_14231 Corchorus olitorius
Cpa.g.sc4.205 Carica papaya
Cre14.g619900 Chlamydomonas reinhardtii
CsaV3_3G016660 Cucumis sativus L.
CSS0046699 Camellia sinensis var. sinensis
DCAR_018141 Daucus carota
Dinv28504 Davidia involucrata
Duzib084G1364 Durio zibethinus
ECA238G1566 Erigeron canadensis
EL10Ac3g05740 Beta vulgaris
Eucgr.A02845 Eucalyptus grandis
FAN01G0056 Fragaria x ananassa
FAN03G0223 Fragaria x ananassa
FAN03G0937 Fragaria x ananassa
FAN06G1618 Fragaria x ananassa
FAN06G4550 Fragaria x ananassa
FAN10G3629 Fragaria x ananassa
FvH4_2g14060 Fragaria vesca
FvH4_7g28750 Fragaria vesca
Glyma.10G240400 Glycine max
Glyma.20G154300 Glycine max
Gohir.A09G179500 Gossypium hirsutum
Gohir.A13G064700 Gossypium hirsutum
Gohir.D09G174800 Gossypium hirsutum
Gohir.D13G056900 Gossypium hirsutum
Gorai.006G196900 Gossypium raimondii
Gorai.013G064300 Gossypium raimondii
GSVIVG01018444001 Vitis vinifera
HanXRQChr14g0461801 Helianthus annuus
Haze_13788 Corylus avellana
HPP92_003528 Vanilla planifolia
Hund04686 Selenicereus undatus
Lalb_Chr06g0160901 Lupinus albus
Lj5g0022226 Lotus japonicus
Lj8A31T63 Lonicera japonica
Lsat_1_v5_gn_2_130220 Lactuca sativa
Manes.14G030600 Manihot esculenta
Mapoly0028s0137 Marchantia polymorpha
MBI12_g36686_MAGBIO Magnolia biondii
MCO04G355 Micromonas commoda
MD01G1193900 Malus domestica
Medtr1g101840 Medicago truncatula
MELO3C006861.2 Cucumis melo
Migut.F00396 Erythranthe guttata
MSTRG.8433 Avicennia marina
Nitab4.5_0000832g0010 Nicotiana tabacum
Nitab4.5_0004911g0020 Nicotiana tabacum
Nn1g01303 Nelumbo nucifera
Oeu047963.2 Olea europaea
Os03g0119000 Oryza sativa ssp. japonica
Peaxi162Scf00192g00519 Petunia axillaris
PGR042G3452 Punica granatum
PGSC0003DMG400024248 Solanum tuberosum
Phvul.007G065700 Phaseolus vulgaris
Potri.012G133100 Populus trichocarpa
Potri.015G135300 Populus trichocarpa
Pp3c22_4190 Physcomitrium patens
PRCOL_00006636 Prasinoderma coloniale
Prupe.2G287700 Prunus persica
Psat6g201680 Pisum sativum
PSO478G4977 Papaver somniferum
PSO782G2014 Papaver somniferum
PSO782G5477 Papaver somniferum
QL09p015278 Quercus lobata
RcHm_v2.0_Chr1g0376261 Rosa chinensis
RcHm_v2.0_Chr1g0376301 Rosa chinensis
Rhsim03G0175100 Rhododendron simsii
Rhsim09G0195200 Rhododendron simsii
Sabra15G0147300 Salix brachista
SalBow2G2245 Salvia bowleyana
Sc13g0008250 Simmondsia chinensis
Sed0023063 Sechium edule
SEGI_15131 Sequoiadendron giganteum
SEGI_34239 Sequoiadendron giganteum
SGA_v2.0_scaffold113G31783 Striga asiatica
SMO139G0115 Selaginella moellendorffii
Solyc03g006820.3 Solanum lycopersicum
Sopen03g002810 Solanum pennellii
Sp6g14140 Schrenkiella parvula
TAR629G0337 Trochodendron aralioides
THA.LOC104825086 Tarenaya hassleriana
Thecc.03G167300 Theobroma cacao
Thhalv10014484m.g Eutrema salsugineum
TPR.G17410 Trifolium pratense
TWI39G0272 Tripterygium wilfordii
unitig_37.g11947 Utricularia gibba
vmacro06741 Vaccinium macrocarpon
vmacro09869 Vaccinium macrocarpon
VMungo0720G2540 Vigna mungo
Zm00001eb001360 Zea mays

User provided reference genes

Program Settings