Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p24630 Brassica napus
Aa31LG10G13740 Aethionema arabicum
Actinidia34602 Actinidia chinensis
Actinidia35975 Actinidia chinensis
Ah.07g201980 Amaranthus hybridus
AL5G41290 Arabidopsis lyrata
Aqoxy2G04092 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea
AT3G59390 Arabidopsis thaliana
ATR0824G015 Amborella trichopoda
Atru.chr3.1494 Acer truncatum
AUR62002299 Chenopodium quinoa
AUR62015391 Chenopodium quinoa
BcaB02g07471 Brassica carinata
BcaC08g44981 Brassica carinata
BolC3t18408H Brassica oleracea
BolC6t37776H Brassica oleracea
BraA07t30108Z Brassica rapa
C06p26110 Brassica napus
C09p49630 Brassica napus
CAN.G1247.5 Capsicum annuum
CANSAT78G1066 Cannabis sativa
CARHR169780 Cardamine hirsuta
Carub.0005s2613 Capsella rubella
Ca_20784_v3 Cicer arietinum L.
Cc03_g13090 Coffea canephora
CDE08G0087 Ceratophyllum demersum
Cfa015166 Carpinus fangiana
Ciclev10021635m.g Citrus clementina
CiPaw.02G054900 Carya illinoinensis
ClCG07G015660 Citrullus lanatus
COL.COLO4_07661 Corchorus olitorius
Cre16.g673841 Chlamydomonas reinhardtii
CsaV3_4G003450 Cucumis sativus L.
CSS0010514 Camellia sinensis var. sinensis
CSS0022675 Camellia sinensis var. sinensis
CSS0026672 Camellia sinensis var. sinensis
CSS0034877 Camellia sinensis var. sinensis
DCAR_029916 Daucus carota
Dinv22729 Davidia involucrata
Duzib151G0050 Durio zibethinus
Duzib268G1109 Durio zibethinus
ECA234G3618 Erigeron canadensis
EL10Ac3g05930 Beta vulgaris
Eucgr.H00372 Eucalyptus grandis
FAN07G2518 Fragaria x ananassa
FAN12G0556 Fragaria x ananassa
FAN12G2405 Fragaria x ananassa
FvH4_4g10770 Fragaria vesca
Glyma.11G127900 Glycine max
Glyma.12G052600 Glycine max
Gohir.A10G137000 Gossypium hirsutum
Gohir.D10G129700 Gossypium hirsutum
Gorai.011G143000 Gossypium raimondii
GSVIVG01010753001 Vitis vinifera
HanXRQChr12g0365531 Helianthus annuus
HanXRQChr16g0525261 Helianthus annuus
HanXRQChr16g0525531 Helianthus annuus
Haze_01514 Corylus avellana
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla
HPP92_009172 Vanilla planifolia
Hund12011 Selenicereus undatus
Lalb_Chr01g0003171 Lupinus albus
Lalb_Chr03g0026141 Lupinus albus
Lj3A196G22 Lonicera japonica
Lj3A196T13 Lonicera japonica
Lj3g0020373 Lotus japonicus
Lsat_1_v5_gn_4_30241 Lactuca sativa
Manes.11G120300 Manihot esculenta
Mapoly0093s0081 Marchantia polymorpha
MCO13G376 Micromonas commoda
MD04G1040100 Malus domestica
Medtr4g067140 Medicago truncatula
MELO3C017715.2 Cucumis melo
Migut.N02075 Erythranthe guttata
MSTRG.9766 Avicennia marina
Nitab4.5_0000130g0340 Nicotiana tabacum
Nn1g09881 Nelumbo nucifera
Oeu034461.3 Olea europaea
Os11g0267100 Oryza sativa ssp. japonica
Peaxi162Scf00126g00003 Petunia axillaris
Peaxi162Scf00126g00015 Petunia axillaris
PGR142G0689 Punica granatum
PGSC0003DMG400030791 Solanum tuberosum
Phvul.011G054600 Phaseolus vulgaris
Potri.019G051300 Populus trichocarpa
Pp3c25_2030 Physcomitrium patens
PRCOL_00001858 Prasinoderma coloniale
Prupe.1G192800 Prunus persica
Prupe.1G193700 Prunus persica
Psat7g091240 Pisum sativum
PSO017G4585 Papaver somniferum
PSO675G6362 Papaver somniferum
QL10p048744 Quercus lobata
QL10p048749 Quercus lobata
RcHm_v2.0_Chr4g0406391 Rosa chinensis
RcHm_v2.0_Chr4g0406821 Rosa chinensis
RcHm_v2.0_Chr4g0406831 Rosa chinensis
Rhsim09G0027900 Rhododendron simsii
Sabra19G0057300 Salix brachista
SalBow3G2028 Salvia bowleyana
Sc13g0006800 Simmondsia chinensis
Sed0010312 Sechium edule
Sed0022341 Sechium edule
SEGI_31631 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06158 Striga asiatica
SMO119G0098 Selaginella moellendorffii
Solyc06g054450.3 Solanum lycopersicum
Sopen06g019520 Solanum pennellii
Sp5g03750 Schrenkiella parvula
TAR362G0864 Trochodendron aralioides
THA.LOC104803704 Tarenaya hassleriana
Thecc.04G180000 Theobroma cacao
Thhalv10006168m.g Eutrema salsugineum
TPR.G34200 Trifolium pratense
TWI15G0224 Tripterygium wilfordii
TWI15G1054 Tripterygium wilfordii
unitig_747.g21679 Utricularia gibba
vmacro00624 Vaccinium macrocarpon
vmacro00625 Vaccinium macrocarpon
VMungo1127G0333 Vigna mungo
Zm00001eb406800 Zea mays

User provided reference genes

Program Settings