Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p40840 Brassica napus
Aa31LG4G5490 Aethionema arabicum
Actinidia15341 Actinidia chinensis
Ah.05g169430 Amaranthus hybridus
AL2G35180 Arabidopsis lyrata
Aqoxy6G01136 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea
AT1G75260 Arabidopsis thaliana
ATR0568G158 Amborella trichopoda
Atru.chr13.448 Acer truncatum
AUR62033855 Chenopodium quinoa
AUR62041670 Chenopodium quinoa
BcaC08g47365 Brassica carinata
BcaNung04385 Brassica carinata
BolC6t39956H Brassica oleracea
BraA07t31626Z Brassica rapa
C06p49230 Brassica napus
CAN.G1226.35 Capsicum annuum
CAN.G424.60 Capsicum annuum
CANSAT25G3418 Cannabis sativa
CANSAT35G1968 Cannabis sativa
CARHR068590 Cardamine hirsuta
Carub.0002s2208 Capsella rubella
Ca_13364_v3 Cicer arietinum L.
Ca_15506_v3 Cicer arietinum L.
CDE06G2487 Ceratophyllum demersum
Cfa008229 Carpinus fangiana
Ciclev10000483m.g Citrus clementina
CiPaw.03G096900 Carya illinoinensis
CiPaw.04G062900 Carya illinoinensis
ClCG08G014920 Citrullus lanatus
COL.COLO4_26292 Corchorus olitorius
Cpa.g.sc3.303 Carica papaya
CsaV3_2G028850 Cucumis sativus L.
CSS0025999 Camellia sinensis var. sinensis
DCAR_017552 Daucus carota
DCAR_019537 Daucus carota
DCAR_020977 Daucus carota
Dinv36098 Davidia involucrata
Dinv39433 Davidia involucrata
Duzib041G0028 Durio zibethinus
Duzib093G1165 Durio zibethinus
ECA232G2514 Erigeron canadensis
ECA247G1288 Erigeron canadensis
Eucgr.F01578 Eucalyptus grandis
FAN15G2069 Fragaria x ananassa
FAN20G2275 Fragaria x ananassa
FAN27G0814 Fragaria x ananassa
FvH4_2g39641 Fragaria vesca
Glyma.04G031100 Glycine max
Glyma.06G031201 Glycine max
Glyma.14G073601 Glycine max
Glyma.17G251400 Glycine max
Gohir.A06G009400 Gossypium hirsutum
Gohir.D06G004900 Gossypium hirsutum
Gorai.010G009500 Gossypium raimondii
Haze_13828 Corylus avellana
HPP92_004792 Vanilla planifolia
Lalb_Chr08g0245891 Lupinus albus
Lalb_Chr24g0398921 Lupinus albus
Lj1g0002957 Lotus japonicus
Lj4P787T11 Lonicera japonica
Lj5g0016594 Lotus japonicus
Manes.05G158000 Manihot esculenta
MBI10_g18263_MAGBIO Magnolia biondii
MD08G1030100 Malus domestica
MD15G1025500 Malus domestica
Medtr1g022365 Medicago truncatula
Medtr1g023790 Medicago truncatula
Medtr3g111950 Medicago truncatula
MELO3C010954.2 Cucumis melo
Migut.O00967 Erythranthe guttata
MSTRG.1269 Avicennia marina
Nitab4.5_0000017g0170 Nicotiana tabacum
Nitab4.5_0002224g0110 Nicotiana tabacum
Nitab4.5_0003711g0040 Nicotiana tabacum
Nitab4.5_0003711g0060 Nicotiana tabacum
Nitab4.5_0004768g0010 Nicotiana tabacum
Nn2g14857 Nelumbo nucifera
Nn5g29644 Nelumbo nucifera
Oeu029831.2 Olea europaea
Oeu049934.1 Olea europaea
Peaxi162Scf00020g00184 Petunia axillaris
Peaxi162Scf00303g00043 Petunia axillaris
PGR004G0534 Punica granatum
PGSC0003DMG400003686 Solanum tuberosum
PGSC0003DMG400005375 Solanum tuberosum
Phvul.001G013600 Phaseolus vulgaris
Phvul.009G058700 Phaseolus vulgaris
Potri.002G034700 Populus trichocarpa
Potri.005G228400 Populus trichocarpa
Prupe.1G377800 Prunus persica
Psat5g012120 Pisum sativum
Psat6g008120 Pisum sativum
PSO541G0933 Papaver somniferum
PSO675G3973 Papaver somniferum
QL12p039628 Quercus lobata
RcHm_v2.0_Chr6g0301251 Rosa chinensis
Rhsim06G0031900 Rhododendron simsii
Sabra02G0027900 Salix brachista
Sabra05G0176300 Salix brachista
Sc02g0005980 Simmondsia chinensis
Sed0000803 Sechium edule
Sed0011246 Sechium edule
SEGI_39042 Sequoiadendron giganteum
SGA_v2.0_scaffold201G41409 Striga asiatica
Solyc04g080520.1 Solanum lycopersicum
Solyc07g025220.1 Solanum lycopersicum
Sopen04g034110 Solanum pennellii
Sopen07g013000 Solanum pennellii
Sp5g30420 Schrenkiella parvula
TAR101G0003 Trochodendron aralioides
TAR245G0008 Trochodendron aralioides
TAR376G0700 Trochodendron aralioides
TAR376G1184 Trochodendron aralioides
TAR381G0716 Trochodendron aralioides
THA.LOC104809215 Tarenaya hassleriana
Thecc.08G029100 Theobroma cacao
Thhalv10018443m.g Eutrema salsugineum
TPR.G12310 Trifolium pratense
TPR.G20164 Trifolium pratense
TPR.G20186 Trifolium pratense
TWI12G1431 Tripterygium wilfordii
unitig_0.g2047 Utricularia gibba
VMungo0647G1119 Vigna mungo
VMungo1309G1357 Vigna mungo

User provided reference genes

Program Settings