Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p02860 Brassica napus
A07p40910 Brassica napus
Aa31LG4G5560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis
Actinidia37997 Actinidia chinensis
Ah.05g177020 Amaranthus hybridus
AL2G35280 Arabidopsis lyrata
Aqoxy5G01584 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea
AT1G75350 Arabidopsis thaliana
ATR0568G031 Amborella trichopoda
Atru.chr13.432 Acer truncatum
Atru.chr5.3351 Acer truncatum
Atru.chr6.1467 Acer truncatum
AUR62014497 Chenopodium quinoa
AUR62038041 Chenopodium quinoa
BcaC02g12477 Brassica carinata
BcaC05g28396 Brassica carinata
BcaC08g47007 Brassica carinata
BcaC08g47361 Brassica carinata
BcaC09g48250 Brassica carinata
BolC4t21983H Brassica oleracea
BolC6t39969H Brassica oleracea
BraA05t19277Z Brassica rapa
BraA07t31631Z Brassica rapa
C04p03490 Brassica napus
C06p49340 Brassica napus
CANSAT56G0974 Cannabis sativa
CARHR068700 Cardamine hirsuta
Carub.0002s2219 Capsella rubella
Ca_18049_v3 Cicer arietinum L.
CBR_g52135 Chara braunii
Cc09_g08950 Coffea canephora
CDE02G2235 Ceratophyllum demersum
CDE06G0798 Ceratophyllum demersum
Cfa013858 Carpinus fangiana
Ciclev10002669m.g Citrus clementina
CiPaw.07G158800 Carya illinoinensis
ClCG05G018790 Citrullus lanatus
COL.COLO4_26271 Corchorus olitorius
Cpa.g.c33902 Carica papaya
Cre08.g365400 Chlamydomonas reinhardtii
CsaV3_3G045380 Cucumis sativus L.
CSS0039262 Camellia sinensis var. sinensis
DCAR_022467 Daucus carota
Dinv39443 Davidia involucrata
Duzib041G0262 Durio zibethinus
Duzib093G0437 Durio zibethinus
ECA232G2653 Erigeron canadensis
EL10Ac1g00643 Beta vulgaris
Eucgr.F01878 Eucalyptus grandis
FAN15G2697 Fragaria x ananassa
FAN20G1429 Fragaria x ananassa
FAN27G1059 Fragaria x ananassa
FvH4_2g39490 Fragaria vesca
Glyma.14G072400 Glycine max
Glyma.17G252600 Glycine max
Gohir.A05G192200 Gossypium hirsutum
Gohir.D05G195400 Gossypium hirsutum
Gohir.D12G058400 Gossypium hirsutum
Gorai.009G200300 Gossypium raimondii
Gorai.010G176600 Gossypium raimondii
GSVIVG01009748001 Vitis vinifera
HanXRQChr09g0268981 Helianthus annuus
HanXRQChr16g0501501 Helianthus annuus
Haze_22533 Corylus avellana
HPP92_009679 Vanilla planifolia
Lalb_Chr22g0354641 Lupinus albus
Lj5g0023115 Lotus japonicus
Lsat_1_v5_gn_4_117720 Lactuca sativa
Manes.05G156800 Manihot esculenta
Mapoly0051s0056 Marchantia polymorpha
MCO12G376 Micromonas commoda
MD08G1027600 Malus domestica
MD15G1023800 Malus domestica
Medtr1g022450 Medicago truncatula
MELO3C003811.2 Cucumis melo
Migut.J00614 Erythranthe guttata
Migut.N00484 Erythranthe guttata
MSTRG.1264 Avicennia marina
Nitab4.5_0003265g0060 Nicotiana tabacum
Nitab4.5_0009228g0020 Nicotiana tabacum
Nn1g04018 Nelumbo nucifera
Oeu002824.1 Olea europaea
Oeu047769.1 Olea europaea
Os01g0633000 Oryza sativa ssp. japonica
Peaxi162Scf00140g10025 Petunia axillaris
PGR031G1371 Punica granatum
PGSC0003DMG400003696 Solanum tuberosum
Phvul.001G012400 Phaseolus vulgaris
Potri.002G033300 Populus trichocarpa
Pp3c13_7030 Physcomitrium patens
Pp3c3_430 Physcomitrium patens
Pp3c4_22510 Physcomitrium patens
Prupe.1G376100 Prunus persica
Psat6g009240 Pisum sativum
PSO731G0021 Papaver somniferum
PSO764G0160 Papaver somniferum
QL02p009087 Quercus lobata
RcHm_v2.0_Chr6g0301461 Rosa chinensis
Rhsim07G0241500 Rhododendron simsii
RhsimUnG0236400 Rhododendron simsii
Sabra02G0026900 Salix brachista
Sabra05G0177600 Salix brachista
SalBow7G2217 Salvia bowleyana
Sc02g0005820 Simmondsia chinensis
Sed0006872 Sechium edule
SEGI_04934 Sequoiadendron giganteum
SGA_v2.0_scaffold201G41391 Striga asiatica
SMO117G0016 Selaginella moellendorffii
Solyc04g080630.4 Solanum lycopersicum
Sopen04g034220 Solanum pennellii
Sp5g30490 Schrenkiella parvula
TAR628G1199 Trochodendron aralioides
THA.LOC104811376 Tarenaya hassleriana
Thecc.08G031000 Theobroma cacao
Thhalv10019294m.g Eutrema salsugineum
TPR.G20152 Trifolium pratense
TWI36G0893 Tripterygium wilfordii
TWI56G0783 Tripterygium wilfordii
unitig_46.g17937 Utricularia gibba
vmacro04538 Vaccinium macrocarpon
VMungo0647G0412 Vigna mungo
Zm00001eb159080 Zea mays

User provided reference genes

Program Settings