Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p11860 Brassica napus
Aa31LG9G13640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis
Actinidia19642 Actinidia chinensis
Actinidia29612 Actinidia chinensis
AL4G29430 Arabidopsis lyrata
Aqoxy5G01327 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea
AT2G33740 Arabidopsis thaliana
ATR0022G028 Amborella trichopoda
Atru.chr13.1045 Acer truncatum
AUR62019013 Chenopodium quinoa
AUR62027854 Chenopodium quinoa
BcaB02g10587 Brassica carinata
BcaC02g11449 Brassica carinata
BolC4t23114H Brassica oleracea
BraA05t20127Z Brassica rapa
C04p15430 Brassica napus
CAN.G1658.2 Capsicum annuum
CANSAT64G0910 Cannabis sativa
CARHR127760 Cardamine hirsuta
Carub.0004s1538 Capsella rubella
Ca_15989_v3 Cicer arietinum L.
Ca_22436_v3 Cicer arietinum L.
Ca_28793_v3 Cicer arietinum L.
CBR_g7959 Chara braunii
Cc10_g15630 Coffea canephora
CDE10G0432 Ceratophyllum demersum
Cfa013698 Carpinus fangiana
Ciclev10002605m.g Citrus clementina
CiPaw.07G167900 Carya illinoinensis
ClCG08G011520 Citrullus lanatus
Cpa.g.sc309.7 Carica papaya
Cre02.g082350 Chlamydomonas reinhardtii
CsaV3_2G030110 Cucumis sativus L.
CSS0028463 Camellia sinensis var. sinensis
CSS0045542 Camellia sinensis var. sinensis
DCAR_012863 Daucus carota
Dinv42635 Davidia involucrata
Dinv44839 Davidia involucrata
Duzib116G0317 Durio zibethinus
ECA232G3909 Erigeron canadensis
EL10Ac1g01111 Beta vulgaris
EL10Ac9g22466 Beta vulgaris
Eucgr.F02129 Eucalyptus grandis
FAN04G0860 Fragaria x ananassa
FAN08G3216 Fragaria x ananassa
FAN13G2708 Fragaria x ananassa
FAN18G0017 Fragaria x ananassa
FvH4_5g35790 Fragaria vesca
Glyma.04G092700 Glycine max
Glyma.06G094500 Glycine max
Gohir.A05G218200 Gossypium hirsutum
Gohir.A06G032628 Gossypium hirsutum
Gohir.D05G223833 Gossypium hirsutum
Gohir.D06G032400 Gossypium hirsutum
Gorai.009G231100 Gossypium raimondii
Gorai.010G035700 Gossypium raimondii
GSVIVG01009140001 Vitis vinifera
HanXRQChr09g0249401 Helianthus annuus
Haze_22342 Corylus avellana
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla
HPP92_002219 Vanilla planifolia
Hund16871 Selenicereus undatus
Hund27007 Selenicereus undatus
Lalb_Chr08g0242401 Lupinus albus
Lj1g0015671 Lotus japonicus
Lsat_1_v5_gn_9_74940 Lactuca sativa
Manes.18G061000 Manihot esculenta
Mapoly0011s0077 Marchantia polymorpha
MBI02_g18284_MAGBIO Magnolia biondii
MD08G1193500 Malus domestica
MD15G1382000 Malus domestica
Medtr3g100630 Medicago truncatula
Medtr4g010890 Medicago truncatula
MELO3C011069.2 Cucumis melo
Migut.J00587 Erythranthe guttata
MSTRG.19530 Avicennia marina
MSTRG.6044 Avicennia marina
Nitab4.5_0001507g0040 Nicotiana tabacum
Nitab4.5_0010618g0040 Nicotiana tabacum
Nn1g05513 Nelumbo nucifera
Nn5g29933 Nelumbo nucifera
Oeu024592.1 Olea europaea
Os03g0186950 Oryza sativa ssp. japonica
Os10g0378300 Oryza sativa ssp. japonica
Peaxi162Scf00281g00415 Petunia axillaris
PGR031G0701 Punica granatum
PGSC0003DMG400012912 Solanum tuberosum
Phvul.009G143300 Phaseolus vulgaris
Potri.002G103700 Populus trichocarpa
Pp3c21_2600 Physcomitrium patens
PRCOL_00002052 Prasinoderma coloniale
Prupe.1G528000 Prunus persica
Psat5g045880 Pisum sativum
PSO170G6492 Papaver somniferum
PSO210G3104 Papaver somniferum
QL09p017221 Quercus lobata
RcHm_v2.0_Chr7g0237451 Rosa chinensis
Rhsim07G0210300 Rhododendron simsii
Sabra02G0081200 Salix brachista
SalBow6G3082 Salvia bowleyana
Sc01g0001050 Simmondsia chinensis
Sed0009042 Sechium edule
Sed0010188 Sechium edule
SEGI_16140 Sequoiadendron giganteum
SEGI_33866 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05208 Striga asiatica
SMO119G0339 Selaginella moellendorffii
Solyc04g076050.4 Solanum lycopersicum
Sopen00g004300 Solanum pennellii
Sopen00g007030 Solanum pennellii
Sopen00g007710 Solanum pennellii
Sp4g16090 Schrenkiella parvula
TAR381G0542 Trochodendron aralioides
THA.LOC104814210 Tarenaya hassleriana
THA.LOC104820685 Tarenaya hassleriana
Thecc.08G068200 Theobroma cacao
Thhalv10017289m.g Eutrema salsugineum
TPR.G26025 Trifolium pratense
TWI12G0161 Tripterygium wilfordii
TWI56G1401 Tripterygium wilfordii
unitig_26.g9169 Utricularia gibba
vmacro04670 Vaccinium macrocarpon
VMungo1309G0647 Vigna mungo
Zm00001eb006540 Zea mays

User provided reference genes

Program Settings