Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG8G6430 Aethionema arabicum
Actinidia00372 Actinidia chinensis
Actinidia27988 Actinidia chinensis
Ah.01g002130 Amaranthus hybridus
AL3G33090 Arabidopsis lyrata
Aqoxy6G02639 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea
AT3G19650 Arabidopsis thaliana
ATR1153G071 Amborella trichopoda
Atru.chr5.2357 Acer truncatum
AUR62017546 Chenopodium quinoa
AUR62044228 Chenopodium quinoa
BcaB06g26035 Brassica carinata
BcaC05g28438 Brassica carinata
C01p44480 Brassica napus
C05p45180 Brassica napus
CAN.G606.58 Capsicum annuum
CANSAT25G0612 Cannabis sativa
CARHR095110 Cardamine hirsuta
Carub.0003s1952 Capsella rubella
Ca_11032_v3 Cicer arietinum L.
Cc02_g19850 Coffea canephora
CDE02G4649 Ceratophyllum demersum
CDE04G2504 Ceratophyllum demersum
Cfa004628 Carpinus fangiana
Ciclev10028827m.g Citrus clementina
CiPaw.05G017700 Carya illinoinensis
ClCG10G010280 Citrullus lanatus
COL.COLO4_32516 Corchorus olitorius
Cpa.g.sc106.50 Carica papaya
CsaV3_4G000230 Cucumis sativus L.
CSS0045592 Camellia sinensis var. sinensis
DCAR_001698 Daucus carota
Dinv15805 Davidia involucrata
Dinv15806 Davidia involucrata
Dinv42237 Davidia involucrata
Duzib132G0234 Durio zibethinus
Duzib248G0443 Durio zibethinus
ECA234G1150 Erigeron canadensis
EL10Ac6g14240 Beta vulgaris
EL10Ac9g22769 Beta vulgaris
Eucgr.G01219 Eucalyptus grandis
FAN15G3526 Fragaria x ananassa
FAN20G1056 Fragaria x ananassa
FAN24G1968 Fragaria x ananassa
FAN24G2779 Fragaria x ananassa
FAN27G2995 Fragaria x ananassa
FvH4_2g03741 Fragaria vesca
FvH4_2g04340 Fragaria vesca
Glyma.01G242500 Glycine max
Glyma.10G257100 Glycine max
Glyma.11G001800 Glycine max
Glyma.20G134100 Glycine max
Gohir.A12G019800 Gossypium hirsutum
Gohir.D12G020000 Gossypium hirsutum
Gorai.008G020400 Gossypium raimondii
GSVIVG01037839001 Vitis vinifera
HanXRQChr10g0292221 Helianthus annuus
Haze_10223 Corylus avellana
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla
HPP92_007764 Vanilla planifolia
Hund24138 Selenicereus undatus
Hund24173 Selenicereus undatus
Lalb_Chr06g0165121 Lupinus albus
Lj1g0018578 Lotus japonicus
Lj5A219G34 Lonicera japonica
Lj5g0005423 Lotus japonicus
Lsat_1_v5_gn_5_114180 Lactuca sativa
Manes.10G081700 Manihot esculenta
MBI19_g46225_MAGBIO Magnolia biondii
MD05G1099900 Malus domestica
Medtr1g106210 Medicago truncatula
Medtr5g005040 Medicago truncatula
MELO3C018010.2 Cucumis melo
Migut.N01140 Erythranthe guttata
MSTRG.5316 Avicennia marina
Nitab4.5_0001105g0020 Nicotiana tabacum
Nitab4.5_0003739g0020 Nicotiana tabacum
Nitab4.5_0008075g0050 Nicotiana tabacum
Nn1g04569 Nelumbo nucifera
Nn5g30577 Nelumbo nucifera
Oeu010445.1 Olea europaea
Oeu037282.1 Olea europaea
Os03g0203000 Oryza sativa ssp. japonica
Peaxi162Scf00016g02848 Petunia axillaris
PGR042G0373 Punica granatum
PGSC0003DMG400025745 Solanum tuberosum
Phvul.002G051700 Phaseolus vulgaris
Phvul.007G045300 Phaseolus vulgaris
Potri.001G295000 Populus trichocarpa
Potri.009G088600 Populus trichocarpa
Prupe.8G144600 Prunus persica
Psat4g154680 Pisum sativum
Psat4g227520 Pisum sativum
Psat6g214920 Pisum sativum
PSO541G6083 Papaver somniferum
PSO675G1322 Papaver somniferum
QL11p030642 Quercus lobata
RcHm_v2.0_Chr6g0253781 Rosa chinensis
Sabra09G0068600 Salix brachista
SalBow3G1994 Salvia bowleyana
Sc18g0007420 Simmondsia chinensis
Sc18g0007460 Simmondsia chinensis
Sed0011178 Sechium edule
SEGI_25142 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43040 Striga asiatica
SHI05153 Sapria himalayana
SMO364G0101 Selaginella moellendorffii
Solyc01g107030.3 Solanum lycopersicum
Sopen01g049300 Solanum pennellii
Sp3g17690 Schrenkiella parvula
TAR362G0484 Trochodendron aralioides
TAR381G1192 Trochodendron aralioides
TAR628G0174 Trochodendron aralioides
TAR633G1585 Trochodendron aralioides
THA.LOC104815220 Tarenaya hassleriana
Thecc.02G116800 Theobroma cacao
Thhalv10021227m.g Eutrema salsugineum
TPR.G27136 Trifolium pratense
TPR.G8308 Trifolium pratense
TWI23G0281 Tripterygium wilfordii
TWI59G0086 Tripterygium wilfordii
vmacro19532 Vaccinium macrocarpon
VMungo0720G2467 Vigna mungo
VMungo1215G3137 Vigna mungo
Zm00001eb007690 Zea mays

User provided reference genes

Program Settings