Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p15090 Brassica napus
Aa31LG2G1120 Aethionema arabicum
Actinidia27358 Actinidia chinensis
Actinidia33723 Actinidia chinensis
AL2G11010 Arabidopsis lyrata
Aqoxy7G00177 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea
AT1G64050 Arabidopsis thaliana
ATR0188G022 Amborella trichopoda
ATR0188G033 Amborella trichopoda
Atru.chr9.2105 Acer truncatum
AUR62010761 Chenopodium quinoa
AUR62019762 Chenopodium quinoa
BcaB07g31428 Brassica carinata
BcaC04g22526 Brassica carinata
BolC9t54717H Brassica oleracea
BraA09t37153Z Brassica rapa
C09p18210 Brassica napus
CANSAT21G1484 Cannabis sativa
CARHR046900 Cardamine hirsuta
Carub.0002s0075 Capsella rubella
Ca_10954_v3 Cicer arietinum L.
Cc08_g15330 Coffea canephora
Cfa012253 Carpinus fangiana
Ciclev10019222m.g Citrus clementina
CiPaw.11G129100 Carya illinoinensis
CiPaw.11G129200 Carya illinoinensis
CiPaw.12G088700 Carya illinoinensis
ClCG07G007820 Citrullus lanatus
COL.COLO4_08352 Corchorus olitorius
Cpa.g.sc201.8 Carica papaya
CsaV3_4G006140 Cucumis sativus L.
CSS0029775 Camellia sinensis var. sinensis
DCAR_005575 Daucus carota
Dinv37589 Davidia involucrata
Dinv38895 Davidia involucrata
Duzib068G0865 Durio zibethinus
Duzib084G0031 Durio zibethinus
Duzib205G1874 Durio zibethinus
ECA246G3109 Erigeron canadensis
EL10Ac5g12844 Beta vulgaris
Eucgr.E00783 Eucalyptus grandis
FAN04G2714 Fragaria x ananassa
FAN04G3088 Fragaria x ananassa
FAN08G1104 Fragaria x ananassa
FAN13G1356 Fragaria x ananassa
FAN13G1859 Fragaria x ananassa
FAN18G3550 Fragaria x ananassa
FvH4_5g03290 Fragaria vesca
Glyma.05G212200 Glycine max
Glyma.08G018700 Glycine max
Gohir.A11G023100 Gossypium hirsutum
Gohir.D11G022800 Gossypium hirsutum
Gorai.007G024600 Gossypium raimondii
GSVIVG01019426001 Vitis vinifera
HanXRQChr06g0166231 Helianthus annuus
HanXRQChr17g0533871 Helianthus annuus
Haze_08744 Corylus avellana
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla
HPP92_003940 Vanilla planifolia
HPP92_023938 Vanilla planifolia
HPP92_023960 Vanilla planifolia
Hund11430 Selenicereus undatus
Hund14261 Selenicereus undatus
Lalb_Chr05g0224451 Lupinus albus
Lalb_Chr09g0333071 Lupinus albus
Lj2A177G41 Lonicera japonica
Lj4g0011337 Lotus japonicus
Lsat_1_v5_gn_3_11600 Lactuca sativa
Manes.01G056900 Manihot esculenta
Manes.02G016400 Manihot esculenta
MBI04_g06288_MAGBIO Magnolia biondii
MD06G1092500 Malus domestica
MD14G1113000 Malus domestica
Medtr8g098995 Medicago truncatula
MELO3C016335.2 Cucumis melo
Migut.E01211 Erythranthe guttata
MSTRG.11952 Avicennia marina
MSTRG.13864 Avicennia marina
MSTRG.1836 Avicennia marina
Nitab4.5_0002381g0070 Nicotiana tabacum
Nitab4.5_0003366g0020 Nicotiana tabacum
Nn1g01698 Nelumbo nucifera
Os02g0265700 Oryza sativa ssp. japonica
Peaxi162Scf00117g01519 Petunia axillaris
PGR042G1146 Punica granatum
PGSC0003DMG400004984 Solanum tuberosum
Phvul.002G160500 Phaseolus vulgaris
Phvul.002G293500 Phaseolus vulgaris
Potri.001G098500 Populus trichocarpa
Potri.003G133100 Populus trichocarpa
Prupe.5G107200 Prunus persica
Psat7g029320 Pisum sativum
PSO063G3925 Papaver somniferum
PSO170G4156 Papaver somniferum
QL02p033236 Quercus lobata
RcHm_v2.0_Chr7g0196491 Rosa chinensis
Rhsim07G0086900 Rhododendron simsii
Sabra01G0073800 Salix brachista
Sabra03G0095400 Salix brachista
Sc01g0009910 Simmondsia chinensis
Sed0002932 Sechium edule
Sed0011828 Sechium edule
SEGI_39127 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31467 Striga asiatica
SHI07081 Sapria himalayana
Solyc12g056170.2 Solanum lycopersicum
Sopen12g028680 Solanum pennellii
Sp2g00660 Schrenkiella parvula
TAR374G1011 Trochodendron aralioides
TAR375G0718 Trochodendron aralioides
TAR629G1352 Trochodendron aralioides
THA.LOC104817764 Tarenaya hassleriana
Thecc.03G287200 Theobroma cacao
Thhalv10023327m.g Eutrema salsugineum
TPR.G12935 Trifolium pratense
TWI15G0222 Tripterygium wilfordii
TWI60G1512 Tripterygium wilfordii
TWI81G0535 Tripterygium wilfordii
unitig_52.g17233 Utricularia gibba
vmacro13979 Vaccinium macrocarpon
VMungo0251G1048 Vigna mungo
VMungo1215G1298 Vigna mungo
Zm00001eb203960 Zea mays
Zm00001eb237760 Zea mays

User provided reference genes

Program Settings