Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39550 Brassica napus
Aa31sc13G30 Aethionema arabicum
Actinidia06291 Actinidia chinensis
Actinidia39362 Actinidia chinensis
Ah.06g193040 Amaranthus hybridus
AL5G20540 Arabidopsis lyrata
Aqoxy1G00067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BC49LP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L83JF4 Arachis hypogaea
AT3G32940 Arabidopsis thaliana
ATR0598G286 Amborella trichopoda
Atru.chr3.2260 Acer truncatum
Atru.chr3.2261 Acer truncatum
Atru.chr3.2266 Acer truncatum
Atru.chr3.2267 Acer truncatum
AUR62000024 Chenopodium quinoa
AUR62019195 Chenopodium quinoa
BcaB06g28229 Brassica carinata
BcaB06g28230 Brassica carinata
BolC7t44392H Brassica oleracea
BraA06t26870Z Brassica rapa
C07p38720 Brassica napus
CAN.G158.5 Capsicum annuum
CANSAT80G0616 Cannabis sativa
CARHR153580 Cardamine hirsuta
Carub.0005s0594 Capsella rubella
Ca_16390_v3 Cicer arietinum L.
Ca_29696_v3 Cicer arietinum L.
CBR_g16071 Chara braunii
Cc01_g01630 Coffea canephora
CDE04G0145 Ceratophyllum demersum
CDE06G1898 Ceratophyllum demersum
Cfa009611 Carpinus fangiana
Ciclev10014343m.g Citrus clementina
CiPaw.13G173200 Carya illinoinensis
ClCG02G023910 Citrullus lanatus
COL.COLO4_34991 Corchorus olitorius
Cpa.g.c38456 Carica papaya
Cpa.g.c44017 Carica papaya
Cpa.g.sc1833.3 Carica papaya
CsaV3_4G023450 Cucumis sativus L.
CSS0049900 Camellia sinensis var. sinensis
DCAR_001991 Daucus carota
DCAR_028615 Daucus carota
Dinv09750 Davidia involucrata
Duzib168G1214 Durio zibethinus
ECA233G5869 Erigeron canadensis
EL10Ac4g10351 Beta vulgaris
Eucgr.J01792 Eucalyptus grandis
Eucgr.J01795 Eucalyptus grandis
Eucgr.L01728 Eucalyptus grandis
FAN16G3355 Fragaria x ananassa
FAN25G3608 Fragaria x ananassa
FvH4_3g44840 Fragaria vesca
Glyma.11G256000 Glycine max
Glyma.18G001100 Glycine max
Gohir.A08G011700 Gossypium hirsutum
Gohir.D08G022200 Gossypium hirsutum
Gorai.004G017500 Gossypium raimondii
GSVIVG01025406001 Vitis vinifera
HanXRQChr02g0056581 Helianthus annuus
Haze_22984 Corylus avellana
HPP92_025714 Vanilla planifolia
HPP92_025756 Vanilla planifolia
Hund21646 Selenicereus undatus
Lalb_Chr11g0075951 Lupinus albus
Lj2C714T4 Lonicera japonica
Lj2C715T2 Lonicera japonica
Lj6g0010790 Lotus japonicus
Lsat_1_v5_gn_6_52400 Lactuca sativa
Lsat_1_v5_gn_6_52480 Lactuca sativa
Manes.15G105700 Manihot esculenta
Mapoly0033s0137 Marchantia polymorpha
MBI13_g29632_MAGBIO Magnolia biondii
MD03G1008800 Malus domestica
MD03G1008900 Malus domestica
MD03G1009300 Malus domestica
MD03G1009900 Malus domestica
MD03G1010000 Malus domestica
MD03G1010200 Malus domestica
Medtr3g083770 Medicago truncatula
MELO3C014671.2 Cucumis melo
Migut.D02531 Erythranthe guttata
MSTRG.18861 Avicennia marina
Nitab4.5_0011368g0010 Nicotiana tabacum
Nn2g15777 Nelumbo nucifera
Oeu023936.1 Olea europaea
Oeu029371.1 Olea europaea
Os08g0100700 Oryza sativa ssp. japonica
Peaxi162Scf00100g00717 Petunia axillaris
PGR042G3578 Punica granatum
PGSC0003DMG400032140 Solanum tuberosum
PGSC0003DMG400032191 Solanum tuberosum
Phvul.001G268200 Phaseolus vulgaris
Potri.001G008700 Populus trichocarpa
Potri.003G216800 Populus trichocarpa
Prupe.6G010100 Prunus persica
Psat5g103200 Pisum sativum
PSO017G3167 Papaver somniferum
PSO170G6775 Papaver somniferum
QL01p007989 Quercus lobata
RcHm_v2.0_Chr5g0081541 Rosa chinensis
Rhsim13G0230200 Rhododendron simsii
Sabra01G0006700 Salix brachista
Sabra03G0161900 Salix brachista
SalBow4G2821 Salvia bowleyana
SalBow6G4223 Salvia bowleyana
Sc16g0012050 Simmondsia chinensis
Sed0014267 Sechium edule
SEGI_09492 Sequoiadendron giganteum
SEGI_19155 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08319 Striga asiatica
SHI02888 Sapria himalayana
Solyc01g006010.3 Solanum lycopersicum
Sopen01g002020 Solanum pennellii
Sp2g18310 Schrenkiella parvula
TAR623G0461 Trochodendron aralioides
TAR623G0845 Trochodendron aralioides
THA.LOC104811062 Tarenaya hassleriana
Thecc.09G212900 Theobroma cacao
Thhalv10003817m.g Eutrema salsugineum
TPR.G22747 Trifolium pratense
TWI60G0389 Tripterygium wilfordii
unitig_8.g3597 Utricularia gibba
vmacro04214 Vaccinium macrocarpon
vmacro22565 Vaccinium macrocarpon
VMungo1383G2426 Vigna mungo

User provided reference genes

Program Settings