Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17870 Brassica napus
Aa31LG7G5740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis
Actinidia03465 Actinidia chinensis
Actinidia29470 Actinidia chinensis
AL1G34960 Arabidopsis lyrata
Aqoxy6G00234 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea
AT1G21760 Arabidopsis thaliana
ATR0584G291 Amborella trichopoda
Atru.chr13.1491 Acer truncatum
Atru.chr13.1492 Acer truncatum
AUR62014328 Chenopodium quinoa
AUR62019071 Chenopodium quinoa
BcaB07g32175 Brassica carinata
BcaC05g26098 Brassica carinata
BolC5t30776H Brassica oleracea
BraA06t24877Z Brassica rapa
C05p20770 Brassica napus
CAN.G2.26 Capsicum annuum
CANSAT11G2315 Cannabis sativa
CARHR022150 Cardamine hirsuta
Carub.0001s2122 Capsella rubella
Ca_27657_v3 Cicer arietinum L.
CBR_g39544 Chara braunii
Cc10_g12020 Coffea canephora
CDE02G1850 Ceratophyllum demersum
Ciclev10001823m.g Citrus clementina
CiPaw.05G220800 Carya illinoinensis
ClCG11G015780 Citrullus lanatus
COL.COLO4_04990 Corchorus olitorius
Cpa.g.c35582 Carica papaya
Cpa.g.c45459 Carica papaya
Cpa.g.sc418.8 Carica papaya
Cre06.g254450 Chlamydomonas reinhardtii
CsaV3_4G028200 Cucumis sativus L.
CSS0035031 Camellia sinensis var. sinensis
DCAR_028205 Daucus carota
Dinv27304 Davidia involucrata
Duzib093G0816 Durio zibethinus
ECA246G2185 Erigeron canadensis
EL10Ac1g01023 Beta vulgaris
Eucgr.F04347 Eucalyptus grandis
FAN15G0088 Fragaria x ananassa
FAN20G0424 Fragaria x ananassa
FAN24G2929 Fragaria x ananassa
FvH4_2g27090 Fragaria vesca
Glyma.04G247500 Glycine max
Glyma.06G115200 Glycine max
Gohir.A06G045300 Gossypium hirsutum
Gohir.D06G045800 Gossypium hirsutum
Gorai.010G051000 Gossypium raimondii
GSVIVG01008855001 Vitis vinifera
HanXRQChr05g0151071 Helianthus annuus
Haze_00430 Corylus avellana
HPP92_004401 Vanilla planifolia
HPP92_027807 Vanilla planifolia
Hund17298 Selenicereus undatus
Lalb_Chr08g0241301 Lupinus albus
Lalb_Chr11g0066051 Lupinus albus
Lj1g0001411 Lotus japonicus
Lj4C628G13 Lonicera japonica
Lsat_1_v5_gn_6_112861 Lactuca sativa
Manes.02G164400 Manihot esculenta
Mapoly0151s0012 Marchantia polymorpha
MBI16_g07653_MAGBIO Magnolia biondii
MCO07G330 Micromonas commoda
MD15G1347000 Malus domestica
Medtr3g088580 Medicago truncatula
Medtr4g068980 Medicago truncatula
MELO3C010482.2 Cucumis melo
Migut.B01582 Erythranthe guttata
Migut.C01127 Erythranthe guttata
MSTRG.1441 Avicennia marina
Nitab4.5_0001803g0010 Nicotiana tabacum
Nitab4.5_0001996g0020 Nicotiana tabacum
Nn1g08814 Nelumbo nucifera
Oeu017952.1 Olea europaea
Oeu040415.1 Olea europaea
Os04g0431200 Oryza sativa ssp. japonica
Peaxi162Scf00914g00315 Petunia axillaris
PGR044G1646 Punica granatum
PGSC0003DMG400000884 Solanum tuberosum
PGSC0003DMG400006698 Solanum tuberosum
Phvul.009G127300 Phaseolus vulgaris
Potri.002G082500 Populus trichocarpa
Potri.005G178600 Populus trichocarpa
Pp3c3_38060 Physcomitrium patens
PRCOL_00004228 Prasinoderma coloniale
Prupe.1G494700 Prunus persica
Psat5g086240 Pisum sativum
Psat5g086280 Pisum sativum
PSO063G0125 Papaver somniferum
PSO170G1538 Papaver somniferum
PSO528G0109 Papaver somniferum
QL09p034323 Quercus lobata
QL09p034368 Quercus lobata
RcHm_v2.0_Chr6g0295971 Rosa chinensis
Rhsim11G0068700 Rhododendron simsii
Rhsim11G0069000 Rhododendron simsii
Rhsim11G0069200 Rhododendron simsii
Sabra02G0064700 Salix brachista
Sc02g0005000 Simmondsia chinensis
Sed0004807 Sechium edule
SEGI_08627 Sequoiadendron giganteum
SEGI_38549 Sequoiadendron giganteum
SEGI_39749 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10459 Striga asiatica
SMO347G0097 Selaginella moellendorffii
Solyc11g012830.3 Solanum lycopersicum
Sopen11g007570 Solanum pennellii
Sp1g19320 Schrenkiella parvula
TAR381G1225 Trochodendron aralioides
TAR625G1219 Trochodendron aralioides
THA.LOC104801868 Tarenaya hassleriana
THA.LOC104810199 Tarenaya hassleriana
Thecc.08G126800 Theobroma cacao
Thhalv10008543m.g Eutrema salsugineum
TPR.G13464 Trifolium pratense
TWI60G1034 Tripterygium wilfordii
unitig_748.g7689 Utricularia gibba
vmacro00839 Vaccinium macrocarpon
VMungo1309G2910 Vigna mungo
Zm00001eb082740 Zea mays
Zm00001eb422580 Zea mays

User provided reference genes

Program Settings