Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24130 Brassica napus
Aa31LG1G25040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis
Ah.07g204100 Amaranthus hybridus
AL4G41890 Arabidopsis lyrata
Aqoxy2G04115 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea
AT2G43235 Arabidopsis thaliana
ATR0743G268 Amborella trichopoda
Atru.chr3.1601 Acer truncatum
Atru.chr3.1609 Acer truncatum
AUR62002605 Chenopodium quinoa
AUR62030023 Chenopodium quinoa
BcaB01g03403 Brassica carinata
BcaB03g16875 Brassica carinata
BcaC01g05249 Brassica carinata
BolC3t15234H Brassica oleracea
BraA03t11623Z Brassica rapa
BraA10t42873Z Brassica rapa
C03p28720 Brassica napus
CAN.G1343.18 Capsicum annuum
CAN.G51.2 Capsicum annuum
CAN.G688.4 Capsicum annuum
CANSAT78G0581 Cannabis sativa
CARHR138310 Cardamine hirsuta
Carub.0004s2570 Capsella rubella
Ca_11400_v3 Cicer arietinum L.
Ca_11403_v3 Cicer arietinum L.
Ca_29592_v3 Cicer arietinum L.
Cc03_g13170 Coffea canephora
CDE09G0849 Ceratophyllum demersum
Cfa015775 Carpinus fangiana
Ciclev10020134m.g Citrus clementina
CiPaw.01G102600 Carya illinoinensis
ClCG07G015820 Citrullus lanatus
COL.COLO4_07837 Corchorus olitorius
COL.COLO4_14416 Corchorus olitorius
COL.COLO4_27134 Corchorus olitorius
Cpa.g.sc71.28 Carica papaya
Cpa.g.sc71.30 Carica papaya
Cre01.g049900 Chlamydomonas reinhardtii
CsaV3_4G003530 Cucumis sativus L.
CSS0049911 Camellia sinensis var. sinensis
DCAR_023918 Daucus carota
Dinv22693 Davidia involucrata
Duzib093G0344 Durio zibethinus
EL10Ac3g06302 Beta vulgaris
Eucgr.A00253 Eucalyptus grandis
FAN07G1916 Fragaria x ananassa
FAN07G2249 Fragaria x ananassa
FAN07G2487 Fragaria x ananassa
FAN17G0796 Fragaria x ananassa
FAN18G1877 Fragaria x ananassa
FvH4_4g11340 Fragaria vesca
FvH4_c17g00080 Fragaria vesca
Glyma.10G295900 Glycine max
Glyma.20G245900 Glycine max
Gohir.A04G096300 Gossypium hirsutum
Gohir.D04G136100 Gossypium hirsutum
Gorai.012G119900 Gossypium raimondii
GSVIVG01013579001 Vitis vinifera
GSVIVG01020265001 Vitis vinifera
HanXRQChr15g0494811 Helianthus annuus
Haze_00720 Corylus avellana
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla
HPP92_024424 Vanilla planifolia
Hund22599 Selenicereus undatus
Lalb_Chr02g0144321 Lupinus albus
Lj3A232G38 Lonicera japonica
Lj5g0018354 Lotus japonicus
Lsat_1_v5_gn_2_51881 Lactuca sativa
Manes.04G048800 Manihot esculenta
Mapoly0004s0159 Marchantia polymorpha
MBI08_g33651_MAGBIO Magnolia biondii
MCO03G554 Micromonas commoda
MCO09G632 Micromonas commoda
MD04G1038000 Malus domestica
Medtr1g116540 Medicago truncatula
MELO3C017699.2 Cucumis melo
Migut.N03113 Erythranthe guttata
MSTRG.24585 Avicennia marina
Nitab4.5_0001049g0100 Nicotiana tabacum
Nitab4.5_0001049g0110 Nicotiana tabacum
Nitab4.5_0002908g0070 Nicotiana tabacum
Nitab4.5_0002908g0080 Nicotiana tabacum
Nn1g09825 Nelumbo nucifera
Oeu029569.3 Olea europaea
Os05g0299200 Oryza sativa ssp. japonica
Peaxi162Scf00286g00119 Petunia axillaris
Peaxi162Scf00286g10017 Petunia axillaris
PGR142G3389 Punica granatum
PGSC0003DMG400021613 Solanum tuberosum
Phvul.007G004000 Phaseolus vulgaris
Potri.007G124600 Populus trichocarpa
Pp3c12_3930 Physcomitrium patens
Pp3c9_3680 Physcomitrium patens
PRCOL_00005486 Prasinoderma coloniale
Prupe.1G187900 Prunus persica
Psat6g241480 Pisum sativum
PSO017G4626 Papaver somniferum
PSO675G4698 Papaver somniferum
QL09p046233 Quercus lobata
QL10p047365 Quercus lobata
RcHm_v2.0_Chr4g0407651 Rosa chinensis
Rhsim09G0030700 Rhododendron simsii
Sabra07G0100700 Salix brachista
SalBow6G1208 Salvia bowleyana
Sc13g0007690 Simmondsia chinensis
Sed0004128 Sechium edule
SEGI_17174 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12573 Striga asiatica
SMO351G0235 Selaginella moellendorffii
Solyc09g098530.4 Solanum lycopersicum
Sopen09g036450 Solanum pennellii
Sp4g25360 Schrenkiella parvula
TAR362G0090 Trochodendron aralioides
Thecc.05G002700 Theobroma cacao
Thhalv10001453m.g Eutrema salsugineum
TPR.G10421 Trifolium pratense
TWI63G1082 Tripterygium wilfordii
unitig_27.g25149 Utricularia gibba
vmacro00601 Vaccinium macrocarpon
VMungo0720G2273 Vigna mungo
Zm00001eb350760 Zea mays

User provided reference genes

Program Settings