Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04450 Brassica napus
Aa31LG2G16340 Aethionema arabicum
Actinidia17850 Actinidia chinensis
Ah.01g020100 Amaranthus hybridus
AL7G17470 Arabidopsis lyrata
Aqoxy6G01433 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea
AT4G33945 Arabidopsis thaliana
ATR0097G005 Amborella trichopoda
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum
AUR62011430 Chenopodium quinoa
AUR62016631 Chenopodium quinoa
BcaB01g01385 Brassica carinata
BcaB01g01387 Brassica carinata
BcaB03g11867 Brassica carinata
BcaB06g27277 Brassica carinata
BolC1t00468H Brassica oleracea
BraA01t00432Z Brassica rapa
C01p04840 Brassica napus
CAN.G406.2 Capsicum annuum
CAN.G406.3 Capsicum annuum
CAN.G93.11 Capsicum annuum
CANSAT25G2015 Cannabis sativa
CARHR242070 Cardamine hirsuta
Carub.0007s0647 Capsella rubella
Ca_12470_v3 Cicer arietinum L.
Cc02_g18510 Coffea canephora
CDE10G0287 Ceratophyllum demersum
CDE10G0955 Ceratophyllum demersum
CDE10G1007 Ceratophyllum demersum
Cfa005432 Carpinus fangiana
Ciclev10028211m.g Citrus clementina
CiPaw.05G054700 Carya illinoinensis
ClCG02G005750 Citrullus lanatus
COL.COLO4_11716 Corchorus olitorius
Cpa.g.sc62.43 Carica papaya
Cre07.g343850 Chlamydomonas reinhardtii
CsaV3_7G008780 Cucumis sativus L.
CSS0020679 Camellia sinensis var. sinensis
CSS0049642 Camellia sinensis var. sinensis
DCAR_000243 Daucus carota
DCAR_022063 Daucus carota
Dinv23589 Davidia involucrata
Dinv42128 Davidia involucrata
Duzib052G0221 Durio zibethinus
ECA236G1018 Erigeron canadensis
EL10Ac9g21824 Beta vulgaris
Eucgr.I01173 Eucalyptus grandis
FAN15G2665 Fragaria x ananassa
FAN20G2731 Fragaria x ananassa
FAN24G3480 Fragaria x ananassa
FAN27G0123 Fragaria x ananassa
FvH4_2g06790 Fragaria vesca
Glyma.07G178400 Glycine max
Glyma.20G009900 Glycine max
Gohir.A01G006000 Gossypium hirsutum
Gohir.D01G006100 Gossypium hirsutum
Gorai.002G007100 Gossypium raimondii
GSVIVG01031798001 Vitis vinifera
HanXRQChr16g0508741 Helianthus annuus
Haze_01887 Corylus avellana
Haze_01888 Corylus avellana
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla
HPP92_004238 Vanilla planifolia
HPP92_004260 Vanilla planifolia
Hund06186 Selenicereus undatus
Lalb_Chr10g0095461 Lupinus albus
Lj2g0017302 Lotus japonicus
Lj9C360T7 Lonicera japonica
Lsat_1_v5_gn_7_87821 Lactuca sativa
Manes.15G143000 Manihot esculenta
Mapoly0088s0010 Marchantia polymorpha
MBI02_g21208_MAGBIO Magnolia biondii
MBI02_g32602_MAGBIO Magnolia biondii
MBI15_g16863_MAGBIO Magnolia biondii
MCO13G090 Micromonas commoda
MD10G1089700 Malus domestica
Medtr1g034000 Medicago truncatula
MELO3C018434.2 Cucumis melo
Migut.B00311 Erythranthe guttata
MSTRG.16765 Avicennia marina
Nitab4.5_0000736g0010 Nicotiana tabacum
Nitab4.5_0002141g0010 Nicotiana tabacum
Nn5g30173 Nelumbo nucifera
Oeu007256.2 Olea europaea
Os02g0761200 Oryza sativa ssp. japonica
Peaxi162Scf00684g00565 Petunia axillaris
PGR142G4090 Punica granatum
PGSC0003DMG400022938 Solanum tuberosum
Phvul.003G012500 Phaseolus vulgaris
Potri.004G144100 Populus trichocarpa
Potri.009G106100 Populus trichocarpa
Pp3c15_12310 Physcomitrium patens
PRCOL_00000949 Prasinoderma coloniale
Prupe.8G116700 Prunus persica
Psat6g096640 Pisum sativum
PSO541G6069 Papaver somniferum
QL11p038259 Quercus lobata
RcHm_v2.0_Chr6g0252951 Rosa chinensis
RcHm_v2.0_Chr6g0259011 Rosa chinensis
Rhsim05G0080700 Rhododendron simsii
Sabra04G0095700 Salix brachista
SalBow6G7179 Salvia bowleyana
Sc08g0000100 Simmondsia chinensis
Sed0027300 Sechium edule
SEGI_04453 Sequoiadendron giganteum
SEGI_22642 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20611 Striga asiatica
SHI05382 Sapria himalayana
SHI05383 Sapria himalayana
SMO116G0201 Selaginella moellendorffii
Solyc11g044870.2 Solanum lycopersicum
Sopen11g020360 Solanum pennellii
Sp7g31680 Schrenkiella parvula
TAR381G0774 Trochodendron aralioides
THA.LOC104807349 Tarenaya hassleriana
Thecc.02G096300 Theobroma cacao
Thhalv10025131m.g Eutrema salsugineum
TPR.G11138 Trifolium pratense
TWI31G0850 Tripterygium wilfordii
unitig_21.g20756 Utricularia gibba
vmacro19482 Vaccinium macrocarpon
VMungo1215G1075 Vigna mungo
Zm00001eb255680 Zea mays

User provided reference genes

Program Settings