Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08290 Brassica napus
A03p59290 Brassica napus
Aa31LG2G20680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis
Ah.09g228540 Amaranthus hybridus
Ah.14g085330 Amaranthus hybridus
AL7G22380 Arabidopsis lyrata
Aqoxy7G02900 Aquilegia oxysepala
AT2G19340 Arabidopsis thaliana
AT4G29870 Arabidopsis thaliana
ATR0580G108 Amborella trichopoda
Atru.chr7.896 Acer truncatum
AUR62027428 Chenopodium quinoa
AUR62031268 Chenopodium quinoa
BcaNung00497 Brassica carinata
BolC1t00921H Brassica oleracea
BolC7t46199H Brassica oleracea
BraA01t00777Z Brassica rapa
BraA03t14986Z Brassica rapa
C01p09330 Brassica napus
C07p57300 Brassica napus
CAN.G1341.6 Capsicum annuum
CANSAT11G1813 Cannabis sativa
CANSAT21G0469 Cannabis sativa
CARHR109790 Cardamine hirsuta
CARHR237780 Cardamine hirsuta
Carub.0003s3356 Capsella rubella
Carub.0004s1476 Capsella rubella
Ca_02129_v3 Cicer arietinum L.
CBR_g37526 Chara braunii
Cc05_g06400 Coffea canephora
CDE06G1002 Ceratophyllum demersum
CDE07G0891 Ceratophyllum demersum
Ciclev10009690m.g Citrus clementina
CiPaw.07G199300 Carya illinoinensis
CiPaw.08G031300 Carya illinoinensis
ClCG06G013810 Citrullus lanatus
COL.COLO4_14462 Corchorus olitorius
Cpa.g.sc115.60 Carica papaya
Cre12.g528150 Chlamydomonas reinhardtii
CsaV3_1G032030 Cucumis sativus L.
CSS0028862 Camellia sinensis var. sinensis
DCAR_018008 Daucus carota
ECA240G0773 Erigeron canadensis
EL10Ac8g19294 Beta vulgaris
Eucgr.C00083 Eucalyptus grandis
FAN07G2370 Fragaria x ananassa
FAN12G1915 Fragaria x ananassa
FAN17G2269 Fragaria x ananassa
FAN22G1136 Fragaria x ananassa
FvH4_4g06900 Fragaria vesca
Glyma.09G061600 Glycine max
Glyma.15G167900 Glycine max
Gohir.A05G408800 Gossypium hirsutum
Gohir.A05G409000 Gossypium hirsutum
Gohir.D04G006400 Gossypium hirsutum
Gohir.D04G006600 Gossypium hirsutum
Gorai.012G007800 Gossypium raimondii
Gorai.012G008000 Gossypium raimondii
GSVIVG01029271001 Vitis vinifera
HanXRQChr09g0245351 Helianthus annuus
Haze_22050 Corylus avellana
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla
HPP92_027392 Vanilla planifolia
Lalb_Chr23g0276701 Lupinus albus
Lj5A659T18 Lonicera japonica
Lj5A660T21 Lonicera japonica
Lj5A667T13 Lonicera japonica
Lj5C609T1 Lonicera japonica
Lj6g0019941 Lotus japonicus
Lsat_1_v5_gn_7_55181 Lactuca sativa
Manes.06G017400 Manihot esculenta
Manes.14G161300 Manihot esculenta
Mapoly0039s0076 Marchantia polymorpha
MBI14_g10729_MAGBIO Magnolia biondii
MD13G1241300 Malus domestica
MD16G1244900 Malus domestica
MD16G1245000 Malus domestica
Medtr2g038390 Medicago truncatula
MELO3C017413.2 Cucumis melo
Migut.J00776 Erythranthe guttata
MSTRG.19359 Avicennia marina
Nitab4.5_0000257g0210 Nicotiana tabacum
Nitab4.5_0009368g0010 Nicotiana tabacum
Oeu012389.1 Olea europaea
Oeu043898.1 Olea europaea
Peaxi162Scf00421g00071 Petunia axillaris
PGR018G0003 Punica granatum
PGR142G0891 Punica granatum
PGR142G1877 Punica granatum
PGSC0003DMG400015598 Solanum tuberosum
Phvul.009G234400 Phaseolus vulgaris
Potri.006G072600 Populus trichocarpa
Potri.018G139600 Populus trichocarpa
Pp3c5_8110 Physcomitrium patens
Prupe.1G072000 Prunus persica
Psat1g142480 Pisum sativum
PSO170G1526 Papaver somniferum
QL02p064675 Quercus lobata
RcHm_v2.0_Chr4g0398801 Rosa chinensis
Rhsim01G0114100 Rhododendron simsii
Sabra06G0054000 Salix brachista
Sabra18G0114100 Salix brachista
SalBow3G0163 Salvia bowleyana
Sc18g0003820 Simmondsia chinensis
Sed0019929 Sechium edule
Sed0022699 Sechium edule
SEGI_37789 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31634 Striga asiatica
SGA_v2.0_scaffold31G12783 Striga asiatica
SHI03067 Sapria himalayana
SMO329G0049 Selaginella moellendorffii
Solyc05g006080.1 Solanum lycopersicum
Sopen05g002100 Solanum pennellii
Sp7g27680 Schrenkiella parvula
TAR383G0359 Trochodendron aralioides
TAR626G1894 Trochodendron aralioides
Thecc.09G192000 Theobroma cacao
Thhalv10026375m.g Eutrema salsugineum
TPR.G2550 Trifolium pratense
TWI38G0675 Tripterygium wilfordii
TWI39G0723 Tripterygium wilfordii
TWI63G0540 Tripterygium wilfordii
unitig_8.g4053 Utricularia gibba
vmacro20799 Vaccinium macrocarpon
Zm00001eb112720 Zea mays
Zm00001eb169590 Zea mays

User provided reference genes

Program Settings