Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG9G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis
Actinidia18024 Actinidia chinensis
Actinidia20544 Actinidia chinensis
Ah.01g007960 Amaranthus hybridus
AL1G28330 Arabidopsis lyrata
Aqoxy5G01073 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea
AT1G16210 Arabidopsis thaliana
ATR0661G177 Amborella trichopoda
Atru.chr5.3479 Acer truncatum
AUR62009986 Chenopodium quinoa
AUR62012975 Chenopodium quinoa
BcaB03g14828 Brassica carinata
BcaC08g45811 Brassica carinata
BolC6t38725H Brassica oleracea
BolC6t39525H Brassica oleracea
BraA07t31267Z Brassica rapa
C06p36040 Brassica napus
CAN.G1235.32 Capsicum annuum
CANSAT25G2216 Cannabis sativa
CARHR016680 Cardamine hirsuta
Carub.0001s1596 Capsella rubella
Ca_15278_v3 Cicer arietinum L.
CBR_g61263 Chara braunii
Cc09_g10450 Coffea canephora
CDE02G2216 Ceratophyllum demersum
CDE09G0466 Ceratophyllum demersum
Cfa005320 Carpinus fangiana
Cfa024524 Carpinus fangiana
Ciclev10029213m.g Citrus clementina
CiPaw.05G087400 Carya illinoinensis
ClCG02G003730 Citrullus lanatus
COL.COLO4_18000 Corchorus olitorius
Cpa.g.sc20.136 Carica papaya
Cre14.g629500 Chlamydomonas reinhardtii
CsaV3_7G001410 Cucumis sativus L.
CSS0039919 Camellia sinensis var. sinensis
Dinv14143 Davidia involucrata
Duzib132G0230 Durio zibethinus
Duzib248G1128 Durio zibethinus
ECA233G3172 Erigeron canadensis
EL10Ac9g21307 Beta vulgaris
Eucgr.I01476 Eucalyptus grandis
FAN15G2553 Fragaria x ananassa
FAN24G2083 Fragaria x ananassa
FAN27G1328 Fragaria x ananassa
FvH4_2g15950 Fragaria vesca
Glyma.04G001700 Glycine max
Glyma.06G001200 Glycine max
Gohir.A01G171900 Gossypium hirsutum
Gohir.A03G206650 Gossypium hirsutum
Gohir.A12G035500 Gossypium hirsutum
Gohir.D01G162900 Gossypium hirsutum
Gohir.D12G037200 Gossypium hirsutum
Gorai.002G202100 Gossypium raimondii
Gorai.005G255900 Gossypium raimondii
Gorai.008G038300 Gossypium raimondii
GSVIVG01023898001 Vitis vinifera
HanXRQChr16g0527781 Helianthus annuus
Haze_02065 Corylus avellana
Hma1.2p1_0076F.1_g039430 Hydrangea macrophylla
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla
HPP92_022389 Vanilla planifolia
HPP92_025891 Vanilla planifolia
Lalb_Chr08g0246771 Lupinus albus
Lj4g0004587 Lotus japonicus
Lj5C174T15 Lonicera japonica
Lj9A402T69 Lonicera japonica
Lsat_1_v5_gn_8_122201 Lactuca sativa
Manes.11G100600 Manihot esculenta
Mapoly0058s0055 Marchantia polymorpha
MBI05_g35101_MAGBIO Magnolia biondii
MCO11G585 Micromonas commoda
MD05G1128500 Malus domestica
MD10G1131800 Malus domestica
Medtr3g118350 Medicago truncatula
MELO3C013309.2 Cucumis melo
Migut.H01073 Erythranthe guttata
MSTRG.16938 Avicennia marina
MSTRG.19958 Avicennia marina
Nitab4.5_0001215g0050 Nicotiana tabacum
Nitab4.5_0001506g0010 Nicotiana tabacum
Nitab4.5_0001629g0040 Nicotiana tabacum
Nitab4.5_0003603g0130 Nicotiana tabacum
Nn5g30887 Nelumbo nucifera
Nn6g31846 Nelumbo nucifera
Oeu029013.1 Olea europaea
Os03g0131800 Oryza sativa ssp. japonica
Os04g0561600 Oryza sativa ssp. japonica
Peaxi162Scf00362g00349 Petunia axillaris
Peaxi162Scf00875g00037 Petunia axillaris
PGR142G2886 Punica granatum
PGSC0003DMG401018633 Solanum tuberosum
Phvul.009G117000 Phaseolus vulgaris
Potri.009G140200 Populus trichocarpa
Pp3c11_730 Physcomitrium patens
Pp3c11_731 Physcomitrium patens
Pp3c7_26990 Physcomitrium patens
PRCOL_00005063 Prasinoderma coloniale
Prupe.8G172600 Prunus persica
Psat5g000920 Pisum sativum
PSO541G1652 Papaver somniferum
PSO541G1702 Papaver somniferum
PSO675G3819 Papaver somniferum
QL11p053294 Quercus lobata
RcHm_v2.0_Chr6g0279491 Rosa chinensis
Sabra09G0108900 Salix brachista
SalBow1G8078 Salvia bowleyana
Sc08g0002620 Simmondsia chinensis
Sed0013069 Sechium edule
Sed0016506 Sechium edule
SGA_v2.0_scaffold32G13327 Striga asiatica
SMO119G0083 Selaginella moellendorffii
Solyc01g111940.4 Solanum lycopersicum
Sopen01g053990 Solanum pennellii
Sp4g00050 Schrenkiella parvula
TAR625G0439 Trochodendron aralioides
THA.LOC104804084 Tarenaya hassleriana
Thecc.02G052300 Theobroma cacao
TPR.G38579 Trifolium pratense
TWI31G0945 Tripterygium wilfordii
unitig_0.g812 Utricularia gibba
vmacro02304 Vaccinium macrocarpon
VMungo1309G1654 Vigna mungo
Zm00001eb074070 Zea mays

User provided reference genes

Program Settings