Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G1230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2145 Anthoceros agrestis
Actinidia16152 Actinidia chinensis
Ah.03g138780 Amaranthus hybridus
AL1G25480 Arabidopsis lyrata
Aqoxy3G00920 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5K1Z4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BKZY3B Arachis hypogaea
AT1G13690 Arabidopsis thaliana
ATR0827G163 Amborella trichopoda
Atru.chr11.1602 Acer truncatum
AUR62003080 Chenopodium quinoa
AUR62003081 Chenopodium quinoa
AUR62007897 Chenopodium quinoa
BcaB02g06466 Brassica carinata
BcaC05g25275 Brassica carinata
BolC5t29901H Brassica oleracea
BraA06t24166Z Brassica rapa
C05p11520 Brassica napus
CANSAT64G0858 Cannabis sativa
CARHR014090 Cardamine hirsuta
Carub.0001s1343 Capsella rubella
Ca_05001_v3 Cicer arietinum L.
CBR_g28640 Chara braunii
CBR_g6581 Chara braunii
Cc11_g11800 Coffea canephora
CDE07G1948 Ceratophyllum demersum
Cfa008862 Carpinus fangiana
Cfa025336 Carpinus fangiana
Ciclev10032914m.g Citrus clementina
CiPaw.05G123800 Carya illinoinensis
ClCG08G010490 Citrullus lanatus
COL.COLO4_12139 Corchorus olitorius
Cpa.g.sc1.151 Carica papaya
Cre06.g288750 Chlamydomonas reinhardtii
CsaV3_6G033740 Cucumis sativus L.
CSS0009604 Camellia sinensis var. sinensis
CSS0036021 Camellia sinensis var. sinensis
DCAR_030047 Daucus carota
Dinv20151 Davidia involucrata
Dinv34051 Davidia involucrata
Duzib147G1163 Durio zibethinus
ECA246G1802 Erigeron canadensis
EL10Ac6g15019 Beta vulgaris
Eucgr.G02430 Eucalyptus grandis
FAN12G1640 Fragaria x ananassa
FAN17G1351 Fragaria x ananassa
FAN22G1444 Fragaria x ananassa
FvH4_4g29710 Fragaria vesca
Glyma.01G062300 Glycine max
Glyma.02G120500 Glycine max
Gohir.A12G057700 Gossypium hirsutum
Gohir.D12G057500 Gossypium hirsutum
Gorai.008G060600 Gossypium raimondii
GSVIVG01010778001 Vitis vinifera
GSVIVG01010785001 Vitis vinifera
HanXRQChr15g0477161 Helianthus annuus
Haze_11885 Corylus avellana
Haze_20966 Corylus avellana
Hma1.2p1_0566F.1_g179940 Hydrangea macrophylla
Hma1.2p1_0566F.1_g179960 Hydrangea macrophylla
HPP92_017644 Vanilla planifolia
Lalb_Chr10g0098941 Lupinus albus
Lj2g0007519 Lotus japonicus
Lj3A1029T38 Lonicera japonica
Lsat_1_v5_gn_3_53680 Lactuca sativa
Manes.01G026600 Manihot esculenta
Mapoly0003s0262 Marchantia polymorpha
MBI16_g03090_MAGBIO Magnolia biondii
MCO13G196 Micromonas commoda
MD13G1060000 Malus domestica
MD16G1059400 Malus domestica
Medtr5g044970 Medicago truncatula
MELO3C011414.2 Cucumis melo
Migut.E00044 Erythranthe guttata
Migut.K00754 Erythranthe guttata
MSTRG.2302 Avicennia marina
Nitab4.5_0001118g0050 Nicotiana tabacum
Nitab4.5_0007615g0010 Nicotiana tabacum
Nitab4.5_0008776g0040 Nicotiana tabacum
Nn3g17499 Nelumbo nucifera
Os03g0600400 Oryza sativa ssp. japonica
Peaxi162Scf00667g00025 Petunia axillaris
PGR119G0343 Punica granatum
PGSC0003DMG400001940 Solanum tuberosum
Phvul.003G040600 Phaseolus vulgaris
Potri.008G097500 Populus trichocarpa
Potri.010G157000 Populus trichocarpa
Pp3c23_9430 Physcomitrium patens
Pp3c24_3880 Physcomitrium patens
PRCOL_00002021 Prasinoderma coloniale
Prupe.1G289400 Prunus persica
Psat2g131760 Pisum sativum
PSO017G1239 Papaver somniferum
PSO478G0833 Papaver somniferum
QL03p073745 Quercus lobata
RcHm_v2.0_Chr4g0437961 Rosa chinensis
SalBow2G3351 Salvia bowleyana
SalBow6G1459 Salvia bowleyana
SalBow7G0227 Salvia bowleyana
SalBow7G1628 Salvia bowleyana
SalBow8G0233 Salvia bowleyana
SalBow8G1566 Salvia bowleyana
SalBow8G3807 Salvia bowleyana
Sc04g0007470 Simmondsia chinensis
Sed0015628 Sechium edule
Sed0021896 Sechium edule
SEGI_14342 Sequoiadendron giganteum
SGA_v2.0_scaffold59G20670 Striga asiatica
SHI54594 Sapria himalayana
SMO340G0125 Selaginella moellendorffii
SMO356G0360 Selaginella moellendorffii
SMO356G0419 Selaginella moellendorffii
SMO356G0608 Selaginella moellendorffii
Solyc04g005350.3 Solanum lycopersicum
Sopen04g001330 Solanum pennellii
Sp1g12220 Schrenkiella parvula
TAR622G1376 Trochodendron aralioides
THA.LOC104812006 Tarenaya hassleriana
Thecc.01G144600 Theobroma cacao
Thhalv10008898m.g Eutrema salsugineum
TPR.G23760 Trifolium pratense
TWI79G1568 Tripterygium wilfordii
unitig_22.g6893 Utricularia gibba
vmacro10437 Vaccinium macrocarpon
VMungo1215G0794 Vigna mungo
Zm00001eb219260 Zea mays

User provided reference genes

Program Settings