Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p07630 Brassica napus
Aa31LG6G10010 Aethionema arabicum
Actinidia15551 Actinidia chinensis
Actinidia17089 Actinidia chinensis
Ah.11g042230 Amaranthus hybridus
AL1G51480 Arabidopsis lyrata
Aqoxy6G03039 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea
AT1G42990 Arabidopsis thaliana
ATR0605G375 Amborella trichopoda
Atru.chr13.34 Acer truncatum
Atru.chr5.2854 Acer truncatum
AUR62035186 Chenopodium quinoa
AUR62040447 Chenopodium quinoa
AUR62041341 Chenopodium quinoa
AUR62043321 Chenopodium quinoa
BcaB04g17767 Brassica carinata
BcaC07g37450 Brassica carinata
BolC8t47771H Brassica oleracea
BraA08t32777Z Brassica rapa
C08p09220 Brassica napus
CAN.G1330.24 Capsicum annuum
CANSAT11G2487 Cannabis sativa
CARHR035240 Cardamine hirsuta
Carub.0001s3439 Capsella rubella
Ca_26636_v3 Cicer arietinum L.
Cc10_g00180 Coffea canephora
CDE05G2672 Ceratophyllum demersum
Cfa014151 Carpinus fangiana
Ciclev10002005m.g Citrus clementina
CiPaw.07G131600 Carya illinoinensis
CiPaw.08G078200 Carya illinoinensis
ClCG11G019110 Citrullus lanatus
COL.COLO4_03408 Corchorus olitorius
Cpa.g.c24967.6 Carica papaya
Cpa.g.sc438.4 Carica papaya
CsaV3_4G037700 Cucumis sativus L.
CSS0018800 Camellia sinensis var. sinensis
DCAR_009857 Daucus carota
DCAR_017622 Daucus carota
Dinv05508 Davidia involucrata
Duzib106G1614 Durio zibethinus
Duzib114G0247 Durio zibethinus
Duzib114G1035 Durio zibethinus
ECA234G2998 Erigeron canadensis
EL10Ac1g01844 Beta vulgaris
Eucgr.A02428 Eucalyptus grandis
Eucgr.F01824 Eucalyptus grandis
Eucgr.F02193 Eucalyptus grandis
Eucgr.F03612 Eucalyptus grandis
Eucgr.G02751 Eucalyptus grandis
Eucgr.L02193 Eucalyptus grandis
FAN04G2011 Fragaria x ananassa
FAN08G3087 Fragaria x ananassa
FAN13G0213 Fragaria x ananassa
FAN18G3272 Fragaria x ananassa
FvH4_5g26440 Fragaria vesca
Glyma.02G161100 Glycine max
Gohir.A05G291700 Gossypium hirsutum
Gohir.A05G409466 Gossypium hirsutum
Gohir.A05G409532 Gossypium hirsutum
Gohir.D04G005900 Gossypium hirsutum
Gohir.D05G292800 Gossypium hirsutum
Gohir.D08G092150 Gossypium hirsutum
Gorai.004G097700 Gossypium raimondii
Gorai.006G220700 Gossypium raimondii
Gorai.009G309200 Gossypium raimondii
Gorai.012G007100 Gossypium raimondii
GSVIVG01013443001 Vitis vinifera
HanXRQChr14g0427941 Helianthus annuus
Haze_22875 Corylus avellana
HPP92_003836 Vanilla planifolia
Hund01813 Selenicereus undatus
Lalb_Chr19g0129191 Lupinus albus
Lj5g0002209 Lotus japonicus
Lsat_1_v5_gn_2_3181 Lactuca sativa
Manes.18G001000 Manihot esculenta
Manes.18G005000 Manihot esculenta
MBI04_g42540_MAGBIO Magnolia biondii
MD06G1002100 Malus domestica
Medtr1g050502 Medicago truncatula
MELO3C017064.2 Cucumis melo
Migut.N02994 Erythranthe guttata
Migut.O00838 Erythranthe guttata
MSTRG.22076 Avicennia marina
MSTRG.24524 Avicennia marina
Nitab4.5_0000464g0100 Nicotiana tabacum
Nn6g31596 Nelumbo nucifera
Oeu042496.1 Olea europaea
Os06g0622700 Oryza sativa ssp. japonica
Peaxi162Scf00385g00068 Petunia axillaris
PGR031G1027 Punica granatum
PGR083G2384 Punica granatum
PGSC0003DMG400010008 Solanum tuberosum
Phvul.007G247600 Phaseolus vulgaris
Potri.002G003050 Populus trichocarpa
Potri.005G257900 Populus trichocarpa
Prupe.5G003000 Prunus persica
Psat6g093400 Pisum sativum
PSO541G3542 Papaver somniferum
PSO675G9277 Papaver somniferum
QL02p016022 Quercus lobata
RcHm_v2.0_Chr7g0217321 Rosa chinensis
Rhsim06G0001900 Rhododendron simsii
Sabra05G0199800 Salix brachista
SalBow6G6430 Salvia bowleyana
Sc02g0009330 Simmondsia chinensis
Sed0007375 Sechium edule
SGA_v2.0_scaffold220G42616 Striga asiatica
Solyc04g082890.3 Solanum lycopersicum
Sopen04g036530 Solanum pennellii
Sp1g32200 Schrenkiella parvula
TAR381G0633 Trochodendron aralioides
THA.LOC104813184 Tarenaya hassleriana
Thecc.08G098200 Theobroma cacao
Thhalv10004635m.g Eutrema salsugineum
TPR.G10624 Trifolium pratense
TPR.G31603 Trifolium pratense
TWI36G0521 Tripterygium wilfordii
TWI56G0455 Tripterygium wilfordii
unitig_18.g30059 Utricularia gibba
unitig_578.g16243 Utricularia gibba
unitig_8.g4814 Utricularia gibba
vmacro21743 Vaccinium macrocarpon
VMungo0720G1847 Vigna mungo
Zm00001eb388050 Zea mays

User provided reference genes

Program Settings