Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02170 Brassica napus
A09p51770 Brassica napus
Aa31LG10G13810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis
Actinidia11297 Actinidia chinensis
Actinidia27645 Actinidia chinensis
Ah.07g202200 Amaranthus hybridus
AL5G41400 Arabidopsis lyrata
Aqoxy2G04144 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea
AT3G59490 Arabidopsis thaliana
ATR0743G009 Amborella trichopoda
Atru.chr4.1240 Acer truncatum
AUR62002326 Chenopodium quinoa
AUR62023861 Chenopodium quinoa
BcaB02g08221 Brassica carinata
BcaC02g10138 Brassica carinata
BcaC07g40478 Brassica carinata
BcaC07g40479 Brassica carinata
BcaNung05942 Brassica carinata
BolC4t24792H Brassica oleracea
BolC4t24903H Brassica oleracea
BolC8t51051H Brassica oleracea
BraA04t15944Z Brassica rapa
BraA09t40612Z Brassica rapa
C04p32460 Brassica napus
C04p33420 Brassica napus
C08p34500 Brassica napus
CAN.G31.8 Capsicum annuum
CANSAT78G1025 Cannabis sativa
CARHR169870 Cardamine hirsuta
Carub.0005s2622 Capsella rubella
Ca_01254_v3 Cicer arietinum L.
Cc07_g21300 Coffea canephora
Cfa015178 Carpinus fangiana
Cfa020094 Carpinus fangiana
Ciclev10021382m.g Citrus clementina
CiPaw.02G053900 Carya illinoinensis
ClCG10G015550 Citrullus lanatus
COL.COLO4_12977 Corchorus olitorius
Cpa.g.sc9.298 Carica papaya
CsaV3_3G040880 Cucumis sativus L.
CSS0032343 Camellia sinensis var. sinensis
DCAR_028445 Daucus carota
Dinv22748 Davidia involucrata
Duzib151G0743 Durio zibethinus
Duzib175G0007 Durio zibethinus
ECA248G0275 Erigeron canadensis
EL10Ac3g05981 Beta vulgaris
Eucgr.H00368 Eucalyptus grandis
FAN07G2433 Fragaria x ananassa
FAN12G2117 Fragaria x ananassa
FAN17G1708 Fragaria x ananassa
FvH4_4g10850 Fragaria vesca
Glyma.13G344600 Glycine max
Glyma.15G029700 Glycine max
Gohir.A10G138500 Gossypium hirsutum
Gohir.D10G128300 Gossypium hirsutum
Gorai.011G141500 Gossypium raimondii
GSVIVG01010791001 Vitis vinifera
HanXRQChr11g0343701 Helianthus annuus
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla
HPP92_001248 Vanilla planifolia
HPP92_001264 Vanilla planifolia
Hund03170 Selenicereus undatus
Lalb_Chr22g0352091 Lupinus albus
Lj3g0008901 Lotus japonicus
Lj6A77G23 Lonicera japonica
Lj6C77T3 Lonicera japonica
Lju337A6G22 Lonicera japonica
Lju337A6T20 Lonicera japonica
Lsat_1_v5_gn_1_77900 Lactuca sativa
Manes.04G043800 Manihot esculenta
MBI08_g09972_MAGBIO Magnolia biondii
MBI08_g33169_MAGBIO Magnolia biondii
MD04G1042500 Malus domestica
Medtr2g098960 Medicago truncatula
MELO3C009823.2 Cucumis melo
Migut.G01000 Erythranthe guttata
MSTRG.9759 Avicennia marina
Nitab4.5_0004117g0020 Nicotiana tabacum
Nitab4.5_0008822g0040 Nicotiana tabacum
Nn3g18564 Nelumbo nucifera
Os09g0515300 Oryza sativa ssp. japonica
Peaxi162Scf00066g02019 Petunia axillaris
Peaxi162Scf00126g00623 Petunia axillaris
Peaxi162Scf00255g00049 Petunia axillaris
Peaxi162Scf00272g00041 Petunia axillaris
Peaxi162Scf00404g00815 Petunia axillaris
Peaxi162Scf00533g00611 Petunia axillaris
Peaxi162Scf00627g00001 Petunia axillaris
Peaxi162Scf01193g00009 Petunia axillaris
PGR142G0422 Punica granatum
PGSC0003DMG400022864 Solanum tuberosum
Phvul.005G153400 Phaseolus vulgaris
Potri.017G028900 Populus trichocarpa
Pp3c9_3600 Physcomitrium patens
Prupe.1G196900 Prunus persica
Psat5g289400 Pisum sativum
Psat5g289440 Pisum sativum
PSO675G8539 Papaver somniferum
PSO732G0675 Papaver somniferum
QL05p011148 Quercus lobata
QL10p050150 Quercus lobata
RcHm_v2.0_Chr4g0406631 Rosa chinensis
Rhsim09G0025200 Rhododendron simsii
Sabra17G0017500 Salix brachista
Sabra17G0062000 Salix brachista
SalBow3G2237 Salvia bowleyana
Sc19g0002910 Simmondsia chinensis
Sed0026513 Sechium edule
SMO364G0376 Selaginella moellendorffii
Solyc11g045210.2 Solanum lycopersicum
Sopen11g020640 Solanum pennellii
Sp5g03670 Schrenkiella parvula
TAR636G2962 Trochodendron aralioides
THA.LOC104803749 Tarenaya hassleriana
Thecc.04G177000 Theobroma cacao
Thhalv10006132m.g Eutrema salsugineum
TPR.G18836 Trifolium pratense
TWI38G0370 Tripterygium wilfordii
unitig_0.g2404 Utricularia gibba
vmacro00644 Vaccinium macrocarpon
vmacro00645 Vaccinium macrocarpon
VMungo1080G0762 Vigna mungo
Zm00001eb318410 Zea mays

User provided reference genes

Program Settings