Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13590 Brassica napus
A07p33290 Brassica napus
Aa31LG2G3000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis
Actinidia06497 Actinidia chinensis
Actinidia17213 Actinidia chinensis
Actinidia17214 Actinidia chinensis
Ah.10g032360 Amaranthus hybridus
AL2G24050 Arabidopsis lyrata
Aqoxy3G00051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea
AT1G66330 Arabidopsis thaliana
ATR0317G069 Amborella trichopoda
Atru.chr1.1900 Acer truncatum
AUR62018213 Chenopodium quinoa
AUR62038703 Chenopodium quinoa
BcaB03g15275 Brassica carinata
BcaB05g24167 Brassica carinata
BcaC03g14742 Brassica carinata
BcaC08g46068 Brassica carinata
BolC2t08324H Brassica oleracea
BolC6t39055H Brassica oleracea
BraA02t06418Z Brassica rapa
BraA07t30960Z Brassica rapa
C02p21930 Brassica napus
C06p39620 Brassica napus
CAN.G222.23 Capsicum annuum
CANSAT64G2718 Cannabis sativa
CARHR058210 Cardamine hirsuta
Carub.0002s1234 Capsella rubella
Ca_05826_v3 Cicer arietinum L.
CBR_g27960 Chara braunii
Cc07_g13520 Coffea canephora
CDE04G1800 Ceratophyllum demersum
Cfa007817 Carpinus fangiana
Ciclev10011587m.g Citrus clementina
CiPaw.03G071500 Carya illinoinensis
ClCG05G011500 Citrullus lanatus
COL.COLO4_10159 Corchorus olitorius
Cpa.g.sc67.47 Carica papaya
CsaV3_3G020810 Cucumis sativus L.
CSS0038083 Camellia sinensis var. sinensis
DCAR_014173 Daucus carota
Dinv28209 Davidia involucrata
Duzib133G1335 Durio zibethinus
ECA246G3278 Erigeron canadensis
EL10Ac2g03168 Beta vulgaris
EL10Ac4g08098 Beta vulgaris
Eucgr.J01597 Eucalyptus grandis
FAN19G0552 Fragaria x ananassa
FAN26G0580 Fragaria x ananassa
FAN28G0309 Fragaria x ananassa
FAN28G0752 Fragaria x ananassa
FvH4_1g28740 Fragaria vesca
Glyma.02G245300 Glycine max
Glyma.14G215400 Glycine max
Gohir.A07G078300 Gossypium hirsutum
Gohir.D07G083100 Gossypium hirsutum
Gorai.001G088700 Gossypium raimondii
GSVIVG01030779001 Vitis vinifera
HanXRQChr13g0418351 Helianthus annuus
Haze_14258 Corylus avellana
HPP92_027416 Vanilla planifolia
Hund13037 Selenicereus undatus
Hund13108 Selenicereus undatus
Lalb_Chr10g0104381 Lupinus albus
Lalb_Chr17g0346141 Lupinus albus
Lj4A263G87 Lonicera japonica
LjContig00141g0011202 Lotus japonicus
Lsat_1_v5_gn_2_20381 Lactuca sativa
Lsat_1_v5_gn_3_64500 Lactuca sativa
Lsat_1_v5_gn_9_50281 Lactuca sativa
Manes.01G117900 Manihot esculenta
Mapoly0055s0114 Marchantia polymorpha
MD09G1263800 Malus domestica
MD17G1258600 Malus domestica
MD17G1259100 Malus domestica
Medtr5g078290 Medicago truncatula
MELO3C020192.2 Cucumis melo
Migut.H02264 Erythranthe guttata
MSTRG.23392 Avicennia marina
Nitab4.5_0000201g0240 Nicotiana tabacum
Nitab4.5_0009518g0020 Nicotiana tabacum
Nn4g24254 Nelumbo nucifera
Oeu012257.1 Olea europaea
Oeu032326.2 Olea europaea
Os05g0148700 Oryza sativa ssp. japonica
Peaxi162Scf00305g00613 Petunia axillaris
PGR004G2672 Punica granatum
PGSC0003DMG402015686 Solanum tuberosum
Phvul.008G235800 Phaseolus vulgaris
Potri.017G129100 Populus trichocarpa
Pp3c16_1710 Physcomitrium patens
Pp3c25_7980 Physcomitrium patens
Pp3c5_8230 Physcomitrium patens
Prupe.3G161300 Prunus persica
Psat2g047960 Pisum sativum
PSO017G3733 Papaver somniferum
PSO478G0940 Papaver somniferum
QL02p058075 Quercus lobata
RcHm_v2.0_Chr3g0493131 Rosa chinensis
RcHm_v2.0_Chr7g0216651 Rosa chinensis
Rhsim10G0177000 Rhododendron simsii
Sabra17G0107600 Salix brachista
SalBow3G2874 Salvia bowleyana
Sc10g0004760 Simmondsia chinensis
Sed0013436 Sechium edule
SEGI_26344 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30955 Striga asiatica
SMO238G0021 Selaginella moellendorffii
Solyc11g011170.2 Solanum lycopersicum
Sopen11g005930 Solanum pennellii
Sp5g21350 Schrenkiella parvula
TAR629G1693 Trochodendron aralioides
THA.LOC104805617 Tarenaya hassleriana
Thecc.04G115200 Theobroma cacao
Thhalv10018612m.g Eutrema salsugineum
TPR.G28257 Trifolium pratense
TPR.G8275 Trifolium pratense
TWI53G0799 Tripterygium wilfordii
unitig_736.g22595 Utricularia gibba
unitig_736.g22596 Utricularia gibba
vmacro07692 Vaccinium macrocarpon
VMungo0647G1427 Vigna mungo
VMungo0647G1521 Vigna mungo
Zm00001eb165460 Zea mays

User provided reference genes

Program Settings