Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p15490 Brassica napus
A08p29270 Brassica napus
Aa31LG7G4930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1029 Anthoceros agrestis
Actinidia15507 Actinidia chinensis
Actinidia17059 Actinidia chinensis
Ah.00g001020 Amaranthus hybridus
AL1G33760 Arabidopsis lyrata
Aqoxy5G00997 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea
AT1G20770 Arabidopsis thaliana
ATR0807G014 Amborella trichopoda
Atru.chr3.2559 Acer truncatum
Atru.chr9.2231 Acer truncatum
Atru.chr9.2243 Acer truncatum
AUR62035138 Chenopodium quinoa
AUR62042908 Chenopodium quinoa
BcaB03g12855 Brassica carinata
BcaB03g14301 Brassica carinata
BcaC06g34834 Brassica carinata
BcaC07g39051 Brassica carinata
BolC7t42820H Brassica oleracea
BolC8t49663H Brassica oleracea
BraA07t29290Z Brassica rapa
BraA08t34862Z Brassica rapa
C07p22820 Brassica napus
C08p20350 Brassica napus
CAN.G206.149 Capsicum annuum
CANSAT56G3734 Cannabis sativa
CARHR021210 Cardamine hirsuta
Carub.0001s2022 Capsella rubella
Ca_15403_v3 Cicer arietinum L.
Ca_29886_v3 Cicer arietinum L.
CBR_g41721 Chara braunii
Cc04_g09300 Coffea canephora
CDE04G0018 Ceratophyllum demersum
Cfa014112 Carpinus fangiana
Ciclev10002499m.g Citrus clementina
CiPaw.08G075400 Carya illinoinensis
ClCG11G018840 Citrullus lanatus
COL.COLO4_07215 Corchorus olitorius
CsaV3_4G037430 Cucumis sativus L.
CSS0005151 Camellia sinensis var. sinensis
Dinv31964 Davidia involucrata
Duzib041G0618 Durio zibethinus
ECA232G5059 Erigeron canadensis
EL10Ac4g09545 Beta vulgaris
Eucgr.K03289 Eucalyptus grandis
FAN01G0923 Fragaria x ananassa
FAN03G2060 Fragaria x ananassa
FAN06G3720 Fragaria x ananassa
FAN06G4434 Fragaria x ananassa
FAN10G2738 Fragaria x ananassa
FAN10G3076 Fragaria x ananassa
FvH4_7g11300 Fragaria vesca
Glyma.03G148200 Glycine max
Glyma.19G151500 Glycine max
Gohir.A01G103700 Gossypium hirsutum
Gohir.D01G089000 Gossypium hirsutum
Gorai.002G114700 Gossypium raimondii
GSVIVG01013393001 Vitis vinifera
HanXRQChr16g0516421 Helianthus annuus
Haze_22830 Corylus avellana
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla
HPP92_012646 Vanilla planifolia
Hund05091 Selenicereus undatus
Lalb_Chr11g0061501 Lupinus albus
Lj1g0026125 Lotus japonicus
Lj4C7G6 Lonicera japonica
Lsat_1_v5_gn_2_1920 Lactuca sativa
Manes.13G069200 Manihot esculenta
Mapoly0189s0009 Marchantia polymorpha
MBI05_g33294_MAGBIO Magnolia biondii
MCO11G314 Micromonas commoda
MD02G1098700 Malus domestica
MD07G1117600 Malus domestica
Medtr3g115650 Medicago truncatula
MELO3C017040.2 Cucumis melo
Migut.M00223 Erythranthe guttata
Migut.M00585 Erythranthe guttata
Migut.N02969 Erythranthe guttata
MSTRG.24503 Avicennia marina
Nitab4.5_0000564g0070 Nicotiana tabacum
Nitab4.5_0006318g0100 Nicotiana tabacum
Nn4g24539 Nelumbo nucifera
Nn5g31000 Nelumbo nucifera
Os04g0509200 Oryza sativa ssp. japonica
Peaxi162Scf00129g00239 Petunia axillaris
PGR031G1135 Punica granatum
PGSC0003DMG400001324 Solanum tuberosum
Phvul.001G146200 Phaseolus vulgaris
Phvul.009G075200 Phaseolus vulgaris
Potri.005G253101 Populus trichocarpa
Pp3c17_23460 Physcomitrium patens
Prupe.2G140800 Prunus persica
Psat5g009800 Pisum sativum
PSO170G2591 Papaver somniferum
PSO210G3458 Papaver somniferum
QL02p015120 Quercus lobata
RcHm_v2.0_Chr1g0349471 Rosa chinensis
RcHm_v2.0_Chr7g0215611 Rosa chinensis
Rhsim06G0005200 Rhododendron simsii
Sabra05G0196300 Salix brachista
SalBow6G2548 Salvia bowleyana
Sc15g0004230 Simmondsia chinensis
Sed0018366 Sechium edule
SEGI_13318 Sequoiadendron giganteum
SEGI_19917 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19644 Striga asiatica
SGA_v2.0_scaffold54G19646 Striga asiatica
Solyc02g087940.4 Solanum lycopersicum
Sopen02g032680 Solanum pennellii
Sp1g18470 Schrenkiella parvula
TAR376G0245 Trochodendron aralioides
TAR628G0625 Trochodendron aralioides
THA.LOC104811476 Tarenaya hassleriana
Thecc.08G062400 Theobroma cacao
Thhalv10008759m.g Eutrema salsugineum
TPR.G38126 Trifolium pratense
TPR.G38169 Trifolium pratense
TWI36G0187 Tripterygium wilfordii
unitig_578.g16237 Utricularia gibba
vmacro21788 Vaccinium macrocarpon
VMungo1383G1920 Vigna mungo
Zm00001eb077760 Zea mays
Zm00001eb205570 Zea mays

User provided reference genes

Program Settings