Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia15208 Actinidia chinensis
arahy.Tifrunner.gnm1.ann1.710PNE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BNP26P Arachis hypogaea
Atru.chr13.1589 Acer truncatum
CANSAT25G1833 Cannabis sativa
CANSAT25G3543 Cannabis sativa
CANSAT78G0622 Cannabis sativa
CANSAT78G1984 Cannabis sativa
CANSAT78G2054 Cannabis sativa
Ca_12735_v3 Cicer arietinum L.
Ca_12741_v3 Cicer arietinum L.
Ca_17011_v3 Cicer arietinum L.
Cc00_g10350 Coffea canephora
Cc10_g13660 Coffea canephora
CDE02G3425 Ceratophyllum demersum
Cfa010576 Carpinus fangiana
Cfa012635 Carpinus fangiana
Ciclev10000428m.g Citrus clementina
Ciclev10003901m.g Citrus clementina
CiPaw.03G184300 Carya illinoinensis
CiPaw.11G076600 Carya illinoinensis
ClCG09G021830 Citrullus lanatus
COL.COLO4_33391 Corchorus olitorius
Cpa.g.sc1156.3 Carica papaya
CsaV3_7G022170 Cucumis sativus L.
DCAR_005662 Daucus carota
DCAR_014364 Daucus carota
DCAR_028204 Daucus carota
Dinv14700 Davidia involucrata
Dinv27264 Davidia involucrata
Duzib093G1452 Durio zibethinus
ECA246G0424 Erigeron canadensis
Eucgr.E01002 Eucalyptus grandis
FAN02G2378 Fragaria x ananassa
FAN15G0899 Fragaria x ananassa
FAN15G3020 Fragaria x ananassa
FAN20G3074 Fragaria x ananassa
FAN24G2475 Fragaria x ananassa
FAN27G0089 Fragaria x ananassa
FAN27G1104 Fragaria x ananassa
FvH4_2g27970 Fragaria vesca
FvH4_2g27980 Fragaria vesca
FvH4_2g27990 Fragaria vesca
Glyma.04G206551 Glycine max
Glyma.06G159000 Glycine max
Glyma.13G034700 Glycine max
Glyma.14G156000 Glycine max
Gohir.A02G070600 Gossypium hirsutum
Gohir.D02G077700 Gossypium hirsutum
Gohir.D02G077800 Gossypium hirsutum
Gorai.005G087300 Gossypium raimondii
Gorai.005G087400 Gossypium raimondii
GSVIVG01008800001 Vitis vinifera
HanXRQChr05g0149711 Helianthus annuus
Haze_03510 Corylus avellana
Haze_08029 Corylus avellana
Haze_13138 Corylus avellana
HPP92_008975 Vanilla planifolia
Lalb_Chr04g0253561 Lupinus albus
Lalb_Chr08g0237871 Lupinus albus
Lalb_Chr11g0068791 Lupinus albus
Lj1g0007441 Lotus japonicus
Lj7E351T3 Lonicera japonica
Lsat_1_v5_gn_6_110341 Lactuca sativa
Manes.02G169100 Manihot esculenta
Manes.18G083050 Manihot esculenta
Mapoly0015s0190 Marchantia polymorpha
MD08G1159900 Malus domestica
MD15G1133200 Malus domestica
Medtr1g026760 Medicago truncatula
Medtr1g026790 Medicago truncatula
Medtr1g026800 Medicago truncatula
Medtr1g026810 Medicago truncatula
Medtr2g010820 Medicago truncatula
Medtr3g097180 Medicago truncatula
MELO3C012710.2 Cucumis melo
Migut.C01072 Erythranthe guttata
Migut.N03258 Erythranthe guttata
MSTRG.24177 Avicennia marina
MSTRG.25355 Avicennia marina
Nn5g28446 Nelumbo nucifera
Oeu016130.1 Olea europaea
Oeu042695.1 Olea europaea
Oeu047174.1 Olea europaea
Os04g0221000 Oryza sativa ssp. japonica
Os04g0539100 Oryza sativa ssp. japonica
Os05g0423200 Oryza sativa ssp. japonica
PGR044G2319 Punica granatum
Phvul.001G067500 Phaseolus vulgaris
Phvul.009G156700 Phaseolus vulgaris
Potri.002G077500 Populus trichocarpa
Pp3c8_15980 Physcomitrium patens
Prupe.1G488800 Prunus persica
Prupe.3G258400 Prunus persica
Psat0s1315g0200 Pisum sativum
Psat5g058120 Pisum sativum
QL09p032233 Quercus lobata
QL12p002389 Quercus lobata
RcHm_v2.0_Chr6g0296791 Rosa chinensis
RcHm_v2.0_Chr6g0296801 Rosa chinensis
RcHm_v2.0_Chr6g0296811 Rosa chinensis
Sabra02G0060900 Salix brachista
SalBow2G2217 Salvia bowleyana
SalBow7G0481 Salvia bowleyana
SalBow7G2443 Salvia bowleyana
Sed0000792 Sechium edule
Sed0021928 Sechium edule
SGA_v2.0_scaffold28G11968 Striga asiatica
SGA_v2.0_scaffold52G18912 Striga asiatica
SGA_v2.0_scaffold52G18913 Striga asiatica
SMO147G0016 Selaginella moellendorffii
TAR381G0115 Trochodendron aralioides
TAR625G0695 Trochodendron aralioides
THA.LOC104812078 Tarenaya hassleriana
Thecc.08G133800 Theobroma cacao
TPR.G24496 Trifolium pratense
TPR.G24541 Trifolium pratense
TPR.G28151 Trifolium pratense
TPR.G28699 Trifolium pratense
TPR.G32494 Trifolium pratense
TPR.G39827 Trifolium pratense
TWI60G0548 Tripterygium wilfordii
unitig_899.g14422 Utricularia gibba
VMungo1309G0219 Vigna mungo
Zm00001eb075330 Zea mays
Zm00001eb075360 Zea mays
Zm00001eb385310 Zea mays

User provided reference genes

Program Settings