Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p21390 Brassica napus
A08p05440 Brassica napus
Aa31LG10G9710 Aethionema arabicum
Aa31LG8G12580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.47 Anthoceros agrestis
Actinidia15304 Actinidia chinensis
Ah.01g019680 Amaranthus hybridus
AL1G54110 Arabidopsis lyrata
Aqoxy517s001 Aquilegia oxysepala
Aqoxy5G01690 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6S3G4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9U11V Arachis hypogaea
AT1G47750 Arabidopsis thaliana
ATR0787G130 Amborella trichopoda
Atru.chr1.2828 Acer truncatum
Atru.chr13.531 Acer truncatum
Atru.chr13.532 Acer truncatum
Atru.chr2.1709 Acer truncatum
AUR62011372 Chenopodium quinoa
AUR62016688 Chenopodium quinoa
BcaB02g11343 Brassica carinata
BcaB04g17481 Brassica carinata
BcaC05g27609 Brassica carinata
BcaC07g37196 Brassica carinata
BolC5t32323H Brassica oleracea
BolC8t47409H Brassica oleracea
BraA05t21047Z Brassica rapa
BraA08t32549Z Brassica rapa
C05p35980 Brassica napus
C08p05980 Brassica napus
CAN.G1126.24 Capsicum annuum
CANSAT01G0611 Cannabis sativa
CARHR037350 Cardamine hirsuta
Carub.0001s3660 Capsella rubella
Ca_13341_v3 Cicer arietinum L.
Cc10_g03250 Coffea canephora
CDE04G1780 Ceratophyllum demersum
CDE07G0964 Ceratophyllum demersum
Cfa018433 Carpinus fangiana
Ciclev10002211m.g Citrus clementina
CiPaw.15G074000 Carya illinoinensis
ClCG08G015290 Citrullus lanatus
COL.COLO4_26358 Corchorus olitorius
Cpa.g.sc64.60 Carica papaya
Cre12.g540500 Chlamydomonas reinhardtii
CsaV3_2G028520 Cucumis sativus L.
CSS0007357 Camellia sinensis var. sinensis
CSS0035456 Camellia sinensis var. sinensis
DCAR_019511 Daucus carota
Dinv36049 Davidia involucrata
Duzib093G1545 Durio zibethinus
Duzib116G0081 Durio zibethinus
Eucgr.E00144 Eucalyptus grandis
FAN15G1700 Fragaria x ananassa
FvH4_2g40140 Fragaria vesca
Glyma.14G076800 Glycine max
Glyma.17G249000 Glycine max
Gohir.A05G196101 Gossypium hirsutum
Gohir.D05G199200 Gossypium hirsutum
Gorai.009G204400 Gossypium raimondii
GSVIVG01009659001 Vitis vinifera
GSVIVG01009660001 Vitis vinifera
HanXRQChr09g0268521 Helianthus annuus
HanXRQChr16g0508571 Helianthus annuus
HPP92_000097 Vanilla planifolia
Lalb_Chr22g0355421 Lupinus albus
Lj2P262T50 Lonicera japonica
Lj4P783T56 Lonicera japonica
Lj5g0012777 Lotus japonicus
Lsat_1_v5_gn_4_121700 Lactuca sativa
Manes.05G162800 Manihot esculenta
Mapoly0002s0024 Marchantia polymorpha
MBI16_g28233_MAGBIO Magnolia biondii
MCO15G563 Micromonas commoda
MD02G1189800 Malus domestica
MD08G1032200 Malus domestica
MD15G1028900 Malus domestica
Medtr1g021995 Medicago truncatula
MELO3C010926.2 Cucumis melo
Migut.C00693 Erythranthe guttata
MSTRG.1292 Avicennia marina
MSTRG.1294 Avicennia marina
Nitab4.5_0000110g0280 Nicotiana tabacum
Nitab4.5_0003246g0120 Nicotiana tabacum
Nn5g29519 Nelumbo nucifera
Oeu005368.1 Olea europaea
Os03g0301950 Oryza sativa ssp. japonica
Os03g0302000 Oryza sativa ssp. japonica
Peaxi162Scf00057g00614 Petunia axillaris
PGR031G3079 Punica granatum
PGSC0003DMG400027850 Solanum tuberosum
Phvul.001G016000 Phaseolus vulgaris
Potri.002G134000 Populus trichocarpa
Potri.014G042000 Populus trichocarpa
Pp3c2_11370 Physcomitrium patens
Prupe.1G382600 Prunus persica
Psat6g007000 Pisum sativum
PSO170G2537 Papaver somniferum
PSO700G0260 Papaver somniferum
QL01p055631 Quercus lobata
QL02p007721 Quercus lobata
RcHm_v2.0_Chr6g0300611 Rosa chinensis
Rhsim06G0035900 Rhododendron simsii
Sabra14G0030600 Salix brachista
SalBow7G2606 Salvia bowleyana
Sc26g0003710 Simmondsia chinensis
Sc26g0003770 Simmondsia chinensis
Sed0009855 Sechium edule
Sed0027834 Sechium edule
SEGI_19994 Sequoiadendron giganteum
SGA_v2.0_scaffold48G18060 Striga asiatica
SMO271G0112 Selaginella moellendorffii
Solyc04g080000.1 Solanum lycopersicum
Sopen04g033590 Solanum pennellii
Sp1g34750 Schrenkiella parvula
SpUn0092_0030 Schrenkiella parvula
TAR369G0338 Trochodendron aralioides
TAR381G0550 Trochodendron aralioides
THA.LOC104816110 Tarenaya hassleriana
Thecc.08G023000 Theobroma cacao
Thhalv10011736m.g Eutrema salsugineum
TPR.G15747 Trifolium pratense
TWI36G1585 Tripterygium wilfordii
TWI56G0916 Tripterygium wilfordii
unitig_749.g13843 Utricularia gibba
VMungo0647G1754 Vigna mungo
Zm00001eb014180 Zea mays

User provided reference genes

Program Settings