Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia19102 Actinidia chinensis
Actinidia19103 Actinidia chinensis
Ah.02g110560 Amaranthus hybridus
Aqoxy3G02888 Aquilegia oxysepala
Aqoxy4G00924 Aquilegia oxysepala
Aqoxy6G01962 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea
ATR1091G013 Amborella trichopoda
Atru.chr9.2492 Acer truncatum
AUR62008196 Chenopodium quinoa
AUR62030948 Chenopodium quinoa
CAN.G164.3 Capsicum annuum
CAN.G263.4 Capsicum annuum
CANSAT80G1835 Cannabis sativa
Cc04_g12080 Coffea canephora
CDE04G1656 Ceratophyllum demersum
Cfa019148 Carpinus fangiana
Ciclev10021475m.g Citrus clementina
CiPaw.12G027800 Carya illinoinensis
ClCG01G013210 Citrullus lanatus
COL.COLO4_30066 Corchorus olitorius
Cpa.g.sc685.1 Carica papaya
Cpa.g.sc685.2 Carica papaya
Cre09.g387134 Chlamydomonas reinhardtii
Cre16.g650500 Chlamydomonas reinhardtii
CsaV3_1G008570 Cucumis sativus L.
CSS0047520 Camellia sinensis var. sinensis
CSS0048541 Camellia sinensis var. sinensis
Dinv38575 Davidia involucrata
Duzib205G1984 Durio zibethinus
ECA246G1070 Erigeron canadensis
EL10Ac5g10733 Beta vulgaris
Eucgr.K02833 Eucalyptus grandis
FAN04G0097 Fragaria x ananassa
FAN08G0279 Fragaria x ananassa
FAN13G1809 Fragaria x ananassa
FAN18G0739 Fragaria x ananassa
FAN18G3270 Fragaria x ananassa
FvH4_5g05440 Fragaria vesca
Glyma.04G184400 Glycine max
Glyma.05G038600 Glycine max
Glyma.06G181500 Glycine max
Glyma.17G088400 Glycine max
Gohir.A12G274800 Gossypium hirsutum
Gohir.D12G275500 Gossypium hirsutum
Gorai.008G296000 Gossypium raimondii
GSVIVG01007727001 Vitis vinifera
GSVIVG01010530001 Vitis vinifera
HanXRQChr05g0132691 Helianthus annuus
HanXRQChr05g0155761 Helianthus annuus
Haze_07514 Corylus avellana
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla
HPP92_001303 Vanilla planifolia
Hund02751 Selenicereus undatus
Hund09446 Selenicereus undatus
Lalb_Chr08g0236581 Lupinus albus
Lalb_Chr08g0236591 Lupinus albus
Lalb_Chr13g0297731 Lupinus albus
Lj1g0005957 Lotus japonicus
Lj4g0025683 Lotus japonicus
Lj9A446T64 Lonicera japonica
Lsat_1_v5_gn_5_15020 Lactuca sativa
Manes.06G106000 Manihot esculenta
Manes.14G064600 Manihot esculenta
MBI10_g27998_MAGBIO Magnolia biondii
MCO05G167 Micromonas commoda
MD06G1172700 Malus domestica
MD14G1178600 Malus domestica
Medtr4g105610 Medicago truncatula
MELO3C002271.2 Cucumis melo
Migut.O00096 Erythranthe guttata
MSTRG.9679 Avicennia marina
Nitab4.5_0000025g0560 Nicotiana tabacum
Nitab4.5_0001514g0060 Nicotiana tabacum
Nn3g16823 Nelumbo nucifera
Nn4g22716 Nelumbo nucifera
Oeu020907.1 Olea europaea
Os05g0170800 Oryza sativa ssp. japonica
Peaxi162Scf00255g01121 Petunia axillaris
PGR044G0892 Punica granatum
PGSC0003DMG401026661 Solanum tuberosum
Phvul.003G201500 Phaseolus vulgaris
Phvul.009G177500 Phaseolus vulgaris
Potri.012G082300 Populus trichocarpa
Potri.015G078100 Populus trichocarpa
Pp3c21_1540 Physcomitrium patens
Prupe.5G172000 Prunus persica
Psat5g000720 Pisum sativum
PSO063G7211 Papaver somniferum
PSO832G4587 Papaver somniferum
QL10p010716 Quercus lobata
QL10p011029 Quercus lobata
RcHm_v2.0_Chr6g0279701 Rosa chinensis
RcHm_v2.0_Chr7g0193391 Rosa chinensis
Rhsim12G0165600 Rhododendron simsii
Sabra12G0058900 Salix brachista
Sabra15G0102700 Salix brachista
SalBow1G2571 Salvia bowleyana
SalBow1G3204 Salvia bowleyana
SalBow5G1201 Salvia bowleyana
SalBow5G5218 Salvia bowleyana
SalBow6G2400 Salvia bowleyana
SalBow6G2479 Salvia bowleyana
SalBow6G3516 Salvia bowleyana
SalBow8G5646 Salvia bowleyana
Sc10g0010120 Simmondsia chinensis
Sed0024030 Sechium edule
SEGI_35494 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31825 Striga asiatica
SGA_v2.0_scaffold90G27902 Striga asiatica
Solyc12g021360.3 Solanum lycopersicum
Sopen12g011710 Solanum pennellii
TAR622G1324 Trochodendron aralioides
TAR629G2947 Trochodendron aralioides
THA.LOC104809262 Tarenaya hassleriana
Thecc.03G014200 Theobroma cacao
TPR.G37565 Trifolium pratense
unitig_60.g25412 Utricularia gibba
vmacro16618 Vaccinium macrocarpon
VMungo1215G2331 Vigna mungo
VMungo1309G2926 Vigna mungo
Zm00001eb124590 Zea mays
Zm00001eb345780 Zea mays

User provided reference genes

Program Settings