Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p25750 Brassica napus
Aa31LG5G3840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis
Actinidia20827 Actinidia chinensis
Actinidia35808 Actinidia chinensis
AL1G14110 Arabidopsis lyrata
AL4G29120 Arabidopsis lyrata
Aqoxy2G03714 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea
AT2G33450 Arabidopsis thaliana
ATR0736G074 Amborella trichopoda
Atru.chr4.1981 Acer truncatum
AUR62015538 Chenopodium quinoa
BcaB02g10562 Brassica carinata
BcaB06g28689 Brassica carinata
BcaC02g07821 Brassica carinata
BcaC02g11431 Brassica carinata
BolC4t23134H Brassica oleracea
BolC4t27775H Brassica oleracea
BraA04t18078Z Brassica rapa
C04p15650 Brassica napus
C04p62980 Brassica napus
CAN.G220.45 Capsicum annuum
CANSAT78G0232 Cannabis sativa
CANSAT78G0887 Cannabis sativa
CARHR127460 Cardamine hirsuta
Carub.0001s0365 Capsella rubella
Carub.0004s1508 Capsella rubella
Ca_05177_v3 Cicer arietinum L.
CBR_g23072 Chara braunii
Cc03_g05900 Coffea canephora
CDE05G0971 Ceratophyllum demersum
CDE11G0022 Ceratophyllum demersum
Cfa014753 Carpinus fangiana
Ciclev10006136m.g Citrus clementina
CiPaw.02G108600 Carya illinoinensis
ClCG05G004160 Citrullus lanatus
COL.COLO4_15930 Corchorus olitorius
Cpa.g.sc44.25 Carica papaya
Cre06.g265800 Chlamydomonas reinhardtii
CsaV3_3G011880 Cucumis sativus L.
CSS0007771 Camellia sinensis var. sinensis
DCAR_002306 Daucus carota
Dinv27088 Davidia involucrata
Duzib052G0467 Durio zibethinus
Duzib151G0304 Durio zibethinus
Duzib212G0996 Durio zibethinus
ECA234G3973 Erigeron canadensis
EL10Ac3g04971 Beta vulgaris
Eucgr.H02995 Eucalyptus grandis
FAN12G2171 Fragaria x ananassa
FAN17G1889 Fragaria x ananassa
FvH4_4g04200 Fragaria vesca
Glyma.10G002600 Glycine max
Gohir.A02G041200 Gossypium hirsutum
Gohir.A10G109400 Gossypium hirsutum
Gohir.D02G047000 Gossypium hirsutum
Gohir.D10G157800 Gossypium hirsutum
Gorai.005G052000 Gossypium raimondii
Gorai.011G177300 Gossypium raimondii
GSVIVG01027870001 Vitis vinifera
HanXRQChr14g0434851 Helianthus annuus
Haze_11428 Corylus avellana
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla
HPP92_012809 Vanilla planifolia
Hund11917 Selenicereus undatus
Lalb_Chr01g0020881 Lupinus albus
Lalb_Chr03g0037521 Lupinus albus
Lj6g0026311 Lotus japonicus
Lsat_1_v5_gn_2_39681 Lactuca sativa
Manes.15G043800 Manihot esculenta
Mapoly0087s0077 Marchantia polymorpha
MCO07G061 Micromonas commoda
MD00G1118000 Malus domestica
MD13G1218400 Malus domestica
MD16G1223800 Malus domestica
Medtr1g041320 Medicago truncatula
MELO3C006400.2 Cucumis melo
Migut.G00496 Erythranthe guttata
MSTRG.9877 Avicennia marina
Nitab4.5_0001425g0090 Nicotiana tabacum
Nitab4.5_0006936g0040 Nicotiana tabacum
Nn3g19733 Nelumbo nucifera
Oeu023312.1 Olea europaea
Oeu059405.1 Olea europaea
Os05g0101400 Oryza sativa ssp. japonica
Peaxi162Scf00602g00421 Petunia axillaris
PGR004G2031 Punica granatum
PGSC0003DMG400017161 Solanum tuberosum
Phvul.007G278700 Phaseolus vulgaris
Potri.008G169800 Populus trichocarpa
Potri.010G068500 Populus trichocarpa
Pp3c5_28500 Physcomitrium patens
Pp3c6_1140 Physcomitrium patens
Prupe.1G045100 Prunus persica
Prupe.8G083300 Prunus persica
Psat6g103800 Pisum sativum
PSO017G6779 Papaver somniferum
PSO063G4949 Papaver somniferum
QL06p019992 Quercus lobata
RcHm_v2.0_Chr4g0394651 Rosa chinensis
RcHm_v2.0_Chr4g0394691 Rosa chinensis
Rhsim04G0174900 Rhododendron simsii
Sabra10G0038500 Salix brachista
SalBow3G4585 Salvia bowleyana
Sc13g0005900 Simmondsia chinensis
Sed0003219 Sechium edule
Sed0015876 Sechium edule
SEGI_13554 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22731 Striga asiatica
SMO131G0001 Selaginella moellendorffii
Solyc09g090410.3 Solanum lycopersicum
Sopen09g033320 Solanum pennellii
Sp1g03290 Schrenkiella parvula
Sp4g15790 Schrenkiella parvula
TAR636G3560 Trochodendron aralioides
THA.LOC104801077 Tarenaya hassleriana
Thecc.04G260000 Theobroma cacao
Thecc.10G124200 Theobroma cacao
Thhalv10017390m.g Eutrema salsugineum
TPR.G32792 Trifolium pratense
TWI53G0221 Tripterygium wilfordii
TWI73G0434 Tripterygium wilfordii
unitig_32.g10851 Utricularia gibba
vmacro08530 Vaccinium macrocarpon
VMungo0684G0001 Vigna mungo
Zm00001eb047510 Zea mays
Zm00001eb222850 Zea mays

User provided reference genes

Program Settings