Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22360 Brassica napus
Aa31LG5G19710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis
Actinidia00930 Actinidia chinensis
Actinidia13913 Actinidia chinensis
Actinidia25353 Actinidia chinensis
Ah.16g103060 Amaranthus hybridus
AL4G37490 Arabidopsis lyrata
Aqoxy1G00736 Aquilegia oxysepala
Aqoxy3G00589 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea
AT2G39910 Arabidopsis thaliana
ATR0580G418 Amborella trichopoda
Atru.chr12.264 Acer truncatum
AUR62012200 Chenopodium quinoa
AUR62022833 Chenopodium quinoa
BcaB01g03579 Brassica carinata
BcaB06g29116 Brassica carinata
BcaC01g05454 Brassica carinata
BcaC02g07378 Brassica carinata
BolC3t15036H Brassica oleracea
BolC4t28269H Brassica oleracea
BraA03t11466Z Brassica rapa
C03p26500 Brassica napus
C04p67680 Brassica napus
CAN.G1280.21 Capsicum annuum
CARHR134830 Cardamine hirsuta
Carub.0004s2204 Capsella rubella
Ca_17139_v3 Cicer arietinum L.
Cc02_g06990 Coffea canephora
CDE05G2573 Ceratophyllum demersum
Cfa005508 Carpinus fangiana
Ciclev10031701m.g Citrus clementina
CiPaw.01G295100 Carya illinoinensis
ClCG11G010510 Citrullus lanatus
COL.COLO4_25614 Corchorus olitorius
Cpa.g.sc19.228 Carica papaya
Cre01.g048600 Chlamydomonas reinhardtii
CsaV3_5G008840 Cucumis sativus L.
CSS0000174 Camellia sinensis var. sinensis
CSS0026214 Camellia sinensis var. sinensis
DCAR_011778 Daucus carota
Dinv34431 Davidia involucrata
Duzib106G2031 Durio zibethinus
ECA232G3403 Erigeron canadensis
EL10Ac2g04780 Beta vulgaris
Eucgr.J00246 Eucalyptus grandis
FAN01G0169 Fragaria x ananassa
FAN02G3398 Fragaria x ananassa
FAN03G1418 Fragaria x ananassa
FAN06G0021 Fragaria x ananassa
FAN06G4757 Fragaria x ananassa
FAN07G1766 Fragaria x ananassa
FAN10G3493 Fragaria x ananassa
FvH4_7g23870 Fragaria vesca
Glyma.18G031000 Glycine max
Gohir.A06G164900 Gossypium hirsutum
Gohir.D06G170400 Gossypium hirsutum
Gorai.010G199300 Gossypium raimondii
GSVIVG01016380001 Vitis vinifera
HanXRQChr09g0246891 Helianthus annuus
Haze_17175 Corylus avellana
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla
HPP92_018568 Vanilla planifolia
HPP92_018569 Vanilla planifolia
Hund13827 Selenicereus undatus
Lalb_Chr18g0052781 Lupinus albus
Lj1A949T58 Lonicera japonica
Lj6g0016911 Lotus japonicus
Lsat_1_v5_gn_9_63220 Lactuca sativa
Manes.10G018500 Manihot esculenta
Mapoly0014s0032 Marchantia polymorpha
MBI14_g08147_MAGBIO Magnolia biondii
MCO16G020 Micromonas commoda
MD07G1212900 Malus domestica
Medtr3g070010 Medicago truncatula
MELO3C025144.2 Cucumis melo
Migut.F00709 Erythranthe guttata
MSTRG.8975 Avicennia marina
Nitab4.5_0000278g0180 Nicotiana tabacum
Nitab4.5_0001379g0140 Nicotiana tabacum
Nitab4.5_0012179g0020 Nicotiana tabacum
Nn2g13585 Nelumbo nucifera
Oeu006660.1 Olea europaea
Os06g0694100 Oryza sativa ssp. japonica
Peaxi162Scf00401g00030 Petunia axillaris
PGR044G0451 Punica granatum
PGSC0003DMG400007303 Solanum tuberosum
Phvul.001G239600 Phaseolus vulgaris
Potri.008G063500 Populus trichocarpa
Pp3c11_8050 Physcomitrium patens
PRCOL_00002967 Prasinoderma coloniale
Prupe.2G245100 Prunus persica
Psat5g127520 Pisum sativum
PSO384G3635 Papaver somniferum
PSO585G0034 Papaver somniferum
QL08p062537 Quercus lobata
RcHm_v2.0_Chr1g0339731 Rosa chinensis
RcHm_v2.0_Chr1g0369221 Rosa chinensis
RcHm_v2.0_Chr2g0110551 Rosa chinensis
Rhsim09G0171700 Rhododendron simsii
Sabra08G0046800 Salix brachista
SalBow5G2373 Salvia bowleyana
Sc11g0007370 Simmondsia chinensis
Sed0002982 Sechium edule
Sed0008304 Sechium edule
SEGI_03712 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01060 Striga asiatica
SHI03521 Sapria himalayana
SMO147G0063 Selaginella moellendorffii
SMO273G0042 Selaginella moellendorffii
SMO273G0059 Selaginella moellendorffii
Solyc06g009690.3 Solanum lycopersicum
Sopen06g004350 Solanum pennellii
Sp4g22220 Schrenkiella parvula
TAR633G1830 Trochodendron aralioides
THA.LOC104810050 Tarenaya hassleriana
Thecc.10G027500 Theobroma cacao
Thhalv10016686m.g Eutrema salsugineum
TPR.G29810 Trifolium pratense
TWI09G0225 Tripterygium wilfordii
unitig_747.g21715 Utricularia gibba
vmacro07007 Vaccinium macrocarpon
vmacro10067 Vaccinium macrocarpon
VMungo1383G2528 Vigna mungo
Zm00001eb226270 Zea mays

User provided reference genes

Program Settings