Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16610 Brassica napus
A03p55890 Brassica napus
Aa31sc16G160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis
Actinidia07213 Actinidia chinensis
AL7G27820 Arabidopsis lyrata
Aqoxy2G01473 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea
AT4G25315 Arabidopsis thaliana
ATR0712G069 Amborella trichopoda
Atru.chr3.3392 Acer truncatum
AUR62023956 Chenopodium quinoa
AUR62036497 Chenopodium quinoa
AUR62037073 Chenopodium quinoa
BcaC06g32822 Brassica carinata
BcaNung06163 Brassica carinata
BolC1t02011H Brassica oleracea
BolC7t45904H Brassica oleracea
BraA01t01616Z Brassica rapa
BraA03t14660Z Brassica rapa
C01p20840 Brassica napus
C07p54180 Brassica napus
CAN.G170.132 Capsicum annuum
CANSAT54G1955 Cannabis sativa
CARHR232720 Cardamine hirsuta
Carub.0007s1570 Capsella rubella
Carub.0008s1058 Capsella rubella
Ca_18451_v3 Cicer arietinum L.
Cc01_g09910 Coffea canephora
CDE02G3751 Ceratophyllum demersum
CDE11G0759 Ceratophyllum demersum
Ciclev10029628m.g Citrus clementina
CiPaw.13G141700 Carya illinoinensis
ClCG01G012780 Citrullus lanatus
CsaV3_1G014480 Cucumis sativus L.
CSS0004675 Camellia sinensis var. sinensis
CSS0048767 Camellia sinensis var. sinensis
CSS0049374 Camellia sinensis var. sinensis
DCAR_015484 Daucus carota
DCAR_018745 Daucus carota
Dinv12530 Davidia involucrata
Dinv29415 Davidia involucrata
Duzib168G0197 Durio zibethinus
Duzib170G0407 Durio zibethinus
Duzib170G0945 Durio zibethinus
ECA238G2178 Erigeron canadensis
EL10Ac9g21059 Beta vulgaris
Eucgr.J00418 Eucalyptus grandis
FAN11G2712 Fragaria x ananassa
FAN16G3386 Fragaria x ananassa
FvH4_3g30110 Fragaria vesca
Glyma.07G187100 Glycine max
Gohir.A03G000008 Gossypium hirsutum
Gohir.A04G148400 Gossypium hirsutum
Gohir.A08G253700 Gossypium hirsutum
Gohir.A09G092200 Gossypium hirsutum
Gohir.A10G243300 Gossypium hirsutum
Gohir.D09G092100 Gossypium hirsutum
Gohir.D09G092300 Gossypium hirsutum
Gorai.006G108700 Gossypium raimondii
Gorai.006G108900 Gossypium raimondii
GSVIVG01023006001 Vitis vinifera
HanXRQChr07g0197671 Helianthus annuus
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla
HPP92_003486 Vanilla planifolia
HPP92_026884 Vanilla planifolia
Hund07714 Selenicereus undatus
Lalb_Chr09g0327121 Lupinus albus
Lalb_Chr16g0383271 Lupinus albus
Lj4g0025300 Lotus japonicus
Lsat_1_v5_gn_2_96480 Lactuca sativa
Manes.04G009950 Manihot esculenta
Manes.04G010000 Manihot esculenta
Manes.11G155900 Manihot esculenta
Mapoly0046s0116 Marchantia polymorpha
MBI01_g43174_MAGBIO Magnolia biondii
MCO03G239 Micromonas commoda
MD03G1133000 Malus domestica
MD14G1038500 Malus domestica
Medtr3g014200 Medicago truncatula
Medtr4g092090 Medicago truncatula
MELO3C004803.2 Cucumis melo
Migut.D02328 Erythranthe guttata
MSTRG.18723 Avicennia marina
MSTRG.21069 Avicennia marina
Nitab4.5_0001542g0090 Nicotiana tabacum
Nitab4.5_0002781g0010 Nicotiana tabacum
Nitab4.5_0006850g0030 Nicotiana tabacum
Nn6g35079 Nelumbo nucifera
Oeu023727.1 Olea europaea
Oeu050173.1 Olea europaea
Os09g0516800 Oryza sativa ssp. japonica
Peaxi162Scf00428g01022 Petunia axillaris
PGR119G0591 Punica granatum
PGSC0003DMG400025251 Solanum tuberosum
Phvul.002G218500 Phaseolus vulgaris
Potri.004G189300 Populus trichocarpa
Pp3c23_15340 Physcomitrium patens
Prupe.6G117700 Prunus persica
Psat7g105560 Pisum sativum
Psat7g105760 Pisum sativum
PSO339G0999 Papaver somniferum
QL01p013949 Quercus lobata
RcHm_v2.0_Chr5g0055601 Rosa chinensis
Rhsim01G0209000 Rhododendron simsii
SalBow5G0633 Salvia bowleyana
SalBow5G1351 Salvia bowleyana
Sc06g0007110 Simmondsia chinensis
Sc12g0004090 Simmondsia chinensis
Sed0008116 Sechium edule
SEGI_33746 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17093 Striga asiatica
SMO144G0106 Selaginella moellendorffii
Solyc01g086860.3 Solanum lycopersicum
Solyc01g112370.3 Solanum lycopersicum
Sopen01g033870 Solanum pennellii
Sp7g23330 Schrenkiella parvula
TAR623G1401 Trochodendron aralioides
THA.LOC104799532 Tarenaya hassleriana
Thecc.09G292900 Theobroma cacao
Thhalv10026551m.g Eutrema salsugineum
TPR.G13925 Trifolium pratense
TWI56G0405 Tripterygium wilfordii
unitig_899.g15369 Utricularia gibba
vmacro14378 Vaccinium macrocarpon
VMungo0251G3527 Vigna mungo
Zm00001eb314390 Zea mays

User provided reference genes

Program Settings