Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p20240 Brassica napus
Aa31LG11G5060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis
Actinidia07421 Actinidia chinensis
Ah.09g227190 Amaranthus hybridus
AL6G30950 Arabidopsis lyrata
AL6G30960 Arabidopsis lyrata
Aqoxy5G03788 Aquilegia oxysepala
Aqoxy5G03790 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea
AT5G19460 Arabidopsis thaliana
AT5G19470 Arabidopsis thaliana
ATR0037G051 Amborella trichopoda
Atru.chr7.1298 Acer truncatum
AUR62011028 Chenopodium quinoa
AUR62033400 Chenopodium quinoa
BolC9t58538H Brassica oleracea
BraA10t44095Z Brassica rapa
C09p56840 Brassica napus
CAN.G929.19 Capsicum annuum
CANSAT56G0016 Cannabis sativa
CANSAT56G1593 Cannabis sativa
CARHR193460 Cardamine hirsuta
Carub.0006s1780 Capsella rubella
Ca_25513_v3 Cicer arietinum L.
Ca_30117_v3 Cicer arietinum L.
Cc06_g09350 Coffea canephora
CDE04G0176 Ceratophyllum demersum
Cfa003290 Carpinus fangiana
Cfa025487 Carpinus fangiana
Ciclev10008605m.g Citrus clementina
Ciclev10008608m.g Citrus clementina
CiPaw.03G235000 Carya illinoinensis
ClCG00G002210 Citrullus lanatus
ClCG00G002580 Citrullus lanatus
ClCG06G010400 Citrullus lanatus
ClCG06G010410 Citrullus lanatus
Cpa.g.sc23.139 Carica papaya
Cre13.g582201 Chlamydomonas reinhardtii
CsaV3_1G030820 Cucumis sativus L.
CSS0033373 Camellia sinensis var. sinensis
DCAR_010440 Daucus carota
Dinv41578 Davidia involucrata
Duzib187G0885 Durio zibethinus
ECA236G3755 Erigeron canadensis
EL10Ac8g18541 Beta vulgaris
Eucgr.E02819 Eucalyptus grandis
FAN19G0264 Fragaria x ananassa
FAN23G1546 Fragaria x ananassa
FAN26G2363 Fragaria x ananassa
FAN26G3318 Fragaria x ananassa
FAN28G2414 Fragaria x ananassa
FvH4_1g05360 Fragaria vesca
Glyma.09G187600 Glycine max
Glyma.18G076000 Glycine max
Gohir.A08G240600 Gossypium hirsutum
Gohir.D08G261300 Gossypium hirsutum
Gorai.004G279400 Gossypium raimondii
GSVIVG01015429001 Vitis vinifera
GSVIVG01015431001 Vitis vinifera
HanXRQChr05g0138301 Helianthus annuus
HanXRQChr05g0139161 Helianthus annuus
Haze_25683 Corylus avellana
HPP92_009101 Vanilla planifolia
Hund26119 Selenicereus undatus
Lalb_Chr14g0371331 Lupinus albus
Lj2g0020407 Lotus japonicus
Lj7A644T17 Lonicera japonica
Lsat_1_v5_gn_8_94740 Lactuca sativa
Manes.16G071100 Manihot esculenta
Mapoly0084s0007 Marchantia polymorpha
MBI06_g04550_MAGBIO Magnolia biondii
MCO11G748 Micromonas commoda
MD15G1189600 Malus domestica
Medtr6g086510 Medicago truncatula
MELO3C025318.2 Cucumis melo
Migut.K00473 Erythranthe guttata
MSTRG.26438 Avicennia marina
Nitab4.5_0002361g0030 Nicotiana tabacum
Nitab4.5_0013433g0030 Nicotiana tabacum
Nn8g39262 Nelumbo nucifera
Oeu060631.1 Olea europaea
Os09g0322200 Oryza sativa ssp. japonica
Peaxi162Scf00560g00615 Petunia axillaris
Peaxi162Scf00560g00629 Petunia axillaris
PGR042G0994 Punica granatum
PGSC0003DMG400024204 Solanum tuberosum
Phvul.004G160700 Phaseolus vulgaris
Potri.006G157700 Populus trichocarpa
Potri.006G157800 Populus trichocarpa
Pp3c12_9090 Physcomitrium patens
Pp3c3_27400 Physcomitrium patens
Pp3c6_16000 Physcomitrium patens
PRCOL_00004258 Prasinoderma coloniale
Prupe.7G186600 Prunus persica
Psat1g037920 Pisum sativum
PSO063G0773 Papaver somniferum
PSO782G3139 Papaver somniferum
QL02p086023 Quercus lobata
QL02p086060 Quercus lobata
RcHm_v2.0_Chr2g0091041 Rosa chinensis
Rhsim03G0244800 Rhododendron simsii
Sabra06G0124600 Salix brachista
SalBow1G0968 Salvia bowleyana
Sc08g0007140 Simmondsia chinensis
Sed0009228 Sechium edule
SEGI_03040 Sequoiadendron giganteum
SEGI_12041 Sequoiadendron giganteum
SEGI_32758 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10152 Striga asiatica
SMO347G0504 Selaginella moellendorffii
Solyc07g009170.4 Solanum lycopersicum
Sopen07g017160 Solanum pennellii
Sp6g24950 Schrenkiella parvula
TAR383G0021 Trochodendron aralioides
THA.LOC104799742 Tarenaya hassleriana
Thecc.09G114600 Theobroma cacao
Thhalv10013889m.g Eutrema salsugineum
TPR.G31453 Trifolium pratense
TPR.G31456 Trifolium pratense
TWI34G0303 Tripterygium wilfordii
TWI34G1467 Tripterygium wilfordii
unitig_748.g7154 Utricularia gibba
unitig_748.g7155 Utricularia gibba
vmacro06195 Vaccinium macrocarpon
VMungo0464G0392 Vigna mungo
Zm00001eb309830 Zea mays

User provided reference genes

Program Settings