Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47680 Brassica napus
Aa31LG9G12480 Aethionema arabicum
Actinidia37914 Actinidia chinensis
Ah.04g161150 Amaranthus hybridus
AL8G16360 Arabidopsis lyrata
Aqoxy6G01612 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9489MQ Arachis hypogaea
AT5G43820 Arabidopsis thaliana
ATR0807G041 Amborella trichopoda
Atru.BG.229.p Acer truncatum
AUR62000761 Chenopodium quinoa
AUR62005208 Chenopodium quinoa
BcaC06g31676 Brassica carinata
BcaC06g34625 Brassica carinata
BolC7t43164H Brassica oleracea
BraA06t27636Z Brassica rapa
C07p26360 Brassica napus
CAN.G1202.7 Capsicum annuum
CANSAT80G1826 Cannabis sativa
CARHR179660 Cardamine hirsuta
Carub.0008s0482 Capsella rubella
Ca_01194_v3 Cicer arietinum L.
Cc00_g16990 Coffea canephora
CDE02G2496 Ceratophyllum demersum
Cfa014110 Carpinus fangiana
Ciclev10000757m.g Citrus clementina
CiPaw.08G075100 Carya illinoinensis
ClCG11G018820 Citrullus lanatus
COL.COLO4_19322 Corchorus olitorius
Cpa.g.sc428.8 Carica papaya
CsaV3_4G037400 Cucumis sativus L.
CSS0036772 Camellia sinensis var. sinensis
CSS0043525 Camellia sinensis var. sinensis
DCAR_006421 Daucus carota
Dinv31962 Davidia involucrata
Duzib041G0398 Durio zibethinus
Duzib093G0304 Durio zibethinus
ECA247G3408 Erigeron canadensis
EL10Ac4g09913 Beta vulgaris
Eucgr.F01783 Eucalyptus grandis
FAN04G3064 Fragaria x ananassa
FAN08G0845 Fragaria x ananassa
FAN08G1583 Fragaria x ananassa
FAN08G1712 Fragaria x ananassa
FAN08G1989 Fragaria x ananassa
FAN18G0123 Fragaria x ananassa
FvH4_5g24880 Fragaria vesca
FvH4_5g25350 Fragaria vesca
FvH4_5g25520 Fragaria vesca
Glyma.15G113600 Glycine max
Gohir.A05G178200 Gossypium hirsutum
Gohir.D05G181600 Gossypium hirsutum
Gorai.009G186600 Gossypium raimondii
GSVIVG01013390001 Vitis vinifera
HanXRQChr03g0064651 Helianthus annuus
HanXRQChr10g0293751 Helianthus annuus
HanXRQChr14g0446721 Helianthus annuus
Haze_22828 Corylus avellana
Hma1.2p1_0060F.1_g032840 Hydrangea macrophylla
Hma1.2p1_0612F.1_g188870 Hydrangea macrophylla
HPP92_001390 Vanilla planifolia
HPP92_001391 Vanilla planifolia
HPP92_001392 Vanilla planifolia
HPP92_012639 Vanilla planifolia
HPP92_013057 Vanilla planifolia
HPP92_028229 Vanilla planifolia
Lalb_Chr03g0040821 Lupinus albus
Lj1g0005723 Lotus japonicus
Lj4E809T0 Lonicera japonica
Lj4P809T22 Lonicera japonica
Lsat_1_v5_gn_2_69281 Lactuca sativa
Lsat_1_v5_gn_9_33960 Lactuca sativa
Manes.01G131700 Manihot esculenta
MD16G1284000 Malus domestica
Medtr2g100200 Medicago truncatula
MELO3C017038.2 Cucumis melo
Migut.O00315 Erythranthe guttata
MSTRG.24922 Avicennia marina
Nitab4.5_0003027g0060 Nicotiana tabacum
Nitab4.5_0004275g0030 Nicotiana tabacum
Nn5g30994 Nelumbo nucifera
Oeu013581.1 Olea europaea
Os02g0304800 Oryza sativa ssp. japonica
PGR083G1452 Punica granatum
PGSC0003DMG400021154 Solanum tuberosum
Phvul.002G162200 Phaseolus vulgaris
Potri.005G247200 Populus trichocarpa
Prupe.5G009500 Prunus persica
Psat5g293680 Pisum sativum
QL02p015030 Quercus lobata
QL02p015096 Quercus lobata
RcHm_v2.0_Chr6g0271861 Rosa chinensis
RcHm_v2.0_Chr6g0271871 Rosa chinensis
RcHm_v2.0_Chr6g0271981 Rosa chinensis
RcHm_v2.0_Chr7g0215761 Rosa chinensis
RcHm_v2.0_Chr7g0215771 Rosa chinensis
RcHm_v2.0_Chr7g0215901 Rosa chinensis
RcHm_v2.0_Chr7g0217231 Rosa chinensis
RcHm_v2.0_Chr7g0219831 Rosa chinensis
Rhsim07G0256800 Rhododendron simsii
Rhsim10G0062900 Rhododendron simsii
Rhsim10G0063100 Rhododendron simsii
Rhsim10G0065400 Rhododendron simsii
Rhsim10G0066100 Rhododendron simsii
Sabra05G0191200 Salix brachista
SalBow6G0752 Salvia bowleyana
Sc16g0011970 Simmondsia chinensis
Sed0014170 Sechium edule
SEGI_33548 Sequoiadendron giganteum
SGA_v2.0_scaffold152G36870 Striga asiatica
SGA_v2.0_scaffold21G09648 Striga asiatica
SHI24507 Sapria himalayana
SMO361G0377 Selaginella moellendorffii
Sopen02g018380 Solanum pennellii
Sp2g08620 Schrenkiella parvula
TAR625G0531 Trochodendron aralioides
THA.LOC104801948 Tarenaya hassleriana
THA.LOC104801950 Tarenaya hassleriana
Thecc.08G062100 Theobroma cacao
Thhalv10003177m.g Eutrema salsugineum
TPR.G6568 Trifolium pratense
TWI39G0099 Tripterygium wilfordii
unitig_46.g18024 Utricularia gibba
vmacro04416 Vaccinium macrocarpon
VMungo0251G2195 Vigna mungo
VMungo1080G0052 Vigna mungo
VMungo1309G0079 Vigna mungo
Zm00001eb135240 Zea mays

User provided reference genes

Program Settings