Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G16930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis
Actinidia13304 Actinidia chinensis
Actinidia31216 Actinidia chinensis
Ah.12g061040 Amaranthus hybridus
AL7G19050 Arabidopsis lyrata
Aqoxy7G01701 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea
AT4G32690 Arabidopsis thaliana
ATR1120G189 Amborella trichopoda
Atru.chr7.2182 Acer truncatum
Atru.chr7.2299 Acer truncatum
AUR62024819 Chenopodium quinoa
AUR62032401 Chenopodium quinoa
BolC1t00620H Brassica oleracea
BolC1t04720H Brassica oleracea
C01p47490 Brassica napus
CAN.G886.7 Capsicum annuum
CANSAT25G2048 Cannabis sativa
CARHR240670 Cardamine hirsuta
Carub.0007s0784 Capsella rubella
Ca_12821_v3 Cicer arietinum L.
Ca_12822_v3 Cicer arietinum L.
Ca_15627_v3 Cicer arietinum L.
Cc08_g08530 Coffea canephora
Cfa013332 Carpinus fangiana
Ciclev10009715m.g Citrus clementina
CiPaw.07G208400 Carya illinoinensis
CiPaw.08G022500 Carya illinoinensis
ClCG08G012410 Citrullus lanatus
COL.COLO4_18710 Corchorus olitorius
Cpa.g.sc205.8 Carica papaya
CsaV3_2G031100 Cucumis sativus L.
CSS0007395 Camellia sinensis var. sinensis
CSS0015630 Camellia sinensis var. sinensis
CSS0020447 Camellia sinensis var. sinensis
CSS0049547 Camellia sinensis var. sinensis
DCAR_001036 Daucus carota
Dinv30243 Davidia involucrata
Duzib150G0825 Durio zibethinus
Duzib168G0494 Durio zibethinus
ECA233G3302 Erigeron canadensis
EL10Ac2g02522 Beta vulgaris
Eucgr.C02883 Eucalyptus grandis
Eucgr.L03669 Eucalyptus grandis
FAN15G3028 Fragaria x ananassa
FAN20G2536 Fragaria x ananassa
FAN27G2409 Fragaria x ananassa
FvH4_2g36290 Fragaria vesca
Glyma.04G079200 Glycine max
Glyma.06G080700 Glycine max
Glyma.14G140400 Glycine max
Gohir.D05G051050 Gossypium hirsutum
Gohir.D13G192400 Gossypium hirsutum
Gorai.009G052700 Gossypium raimondii
Gorai.013G218300 Gossypium raimondii
GSVIVG01035713001 Vitis vinifera
HanXRQChr07g0192221 Helianthus annuus
HanXRQChr07g0195131 Helianthus annuus
Haze_21823 Corylus avellana
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla
HPP92_005176 Vanilla planifolia
Hund25645 Selenicereus undatus
Lalb_Chr08g0243361 Lupinus albus
Lalb_Chr22g0361001 Lupinus albus
Lj1g0018426 Lotus japonicus
Lj1g0018927 Lotus japonicus
Lj8A606G25 Lonicera japonica
Lsat_1_v5_gn_6_11301 Lactuca sativa
Lsat_1_v5_gn_6_11341 Lactuca sativa
Manes.03G064300 Manihot esculenta
Manes.16G067000 Manihot esculenta
MBI04_g08934_MAGBIO Magnolia biondii
MD15G1099500 Malus domestica
Medtr1g008700 Medicago truncatula
Medtr3g109420 Medicago truncatula
MELO3C011160.2 Cucumis melo
Migut.A00249 Erythranthe guttata
Nitab4.5_0000250g0190 Nicotiana tabacum
Nitab4.5_0000250g0200 Nicotiana tabacum
Nitab4.5_0002393g0090 Nicotiana tabacum
Nn8g39214 Nelumbo nucifera
Oeu011261.1 Olea europaea
Oeu014655.1 Olea europaea
Os06g0591600 Oryza sativa ssp. japonica
Peaxi162Scf00105g00059 Petunia axillaris
Peaxi162Scf00105g00513 Petunia axillaris
PGR044G2495 Punica granatum
PGSC0003DMG400014492 Solanum tuberosum
Phvul.001G060001 Phaseolus vulgaris
Phvul.009G104900 Phaseolus vulgaris
Potri.006G244300 Populus trichocarpa
Potri.018G036200 Populus trichocarpa
Pp3c1_3380 Physcomitrium patens
Pp3c6_250 Physcomitrium patens
Prupe.1G454300 Prunus persica
Psat0s1478g0160 Pisum sativum
Psat6g005800 Pisum sativum
PSO063G0005 Papaver somniferum
PSO782G3114 Papaver somniferum
QL12p026136 Quercus lobata
RcHm_v2.0_Chr6g0305591 Rosa chinensis
Rhsim02G0184100 Rhododendron simsii
Sabra06G0191200 Salix brachista
SalBow1G5171 Salvia bowleyana
Sc06g0000690 Simmondsia chinensis
Sed0020806 Sechium edule
SEGI_02532 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11530 Striga asiatica
SMO164G0258 Selaginella moellendorffii
Solyc08g068070.3 Solanum lycopersicum
Solyc08g068090.3 Solanum lycopersicum
Sopen08g021960 Solanum pennellii
Sopen08g021970 Solanum pennellii
Sp7g30450 Schrenkiella parvula
TAR624G0931 Trochodendron aralioides
TAR636G1550 Trochodendron aralioides
THA.LOC104803814 Tarenaya hassleriana
Thecc.09G038200 Theobroma cacao
Thhalv10026389m.g Eutrema salsugineum
TPR.G12079 Trifolium pratense
TPR.G1342 Trifolium pratense
TWI34G1412 Tripterygium wilfordii
VMungo0647G2273 Vigna mungo
VMungo1309G2769 Vigna mungo
Zm00001eb386050 Zea mays

User provided reference genes

Program Settings