Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p69370 Brassica napus
A10p00090 Brassica napus
Aa31LG1G11550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis
Actinidia30939 Actinidia chinensis
AL1G10080 Arabidopsis lyrata
Aqoxy3G02673 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PL2W5K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea
AT1G02145 Arabidopsis thaliana
ATR0665G630 Amborella trichopoda
Atru.chr5.108 Acer truncatum
Atru.chr5.109 Acer truncatum
AUR62013761 Chenopodium quinoa
AUR62023393 Chenopodium quinoa
BcaB03g13635 Brassica carinata
BcaC07g42336 Brassica carinata
BcaC07g42440 Brassica carinata
BolC5t28793H Brassica oleracea
BolC8t52928H Brassica oleracea
BolC8t52929H Brassica oleracea
BraA09t42282Z Brassica rapa
BraA10t42287Z Brassica rapa
C05p00060 Brassica napus
C08p54190 Brassica napus
CAN.G1585.8 Capsicum annuum
CANSAT25G1963 Cannabis sativa
CARHR000180 Cardamine hirsuta
Carub.0001s0002 Capsella rubella
Ca_14798_v3 Cicer arietinum L.
Cc02_g25210 Coffea canephora
Cc02_g25220 Coffea canephora
Cc02_g25230 Coffea canephora
CDE02G2871 Ceratophyllum demersum
Ciclev10019843m.g Citrus clementina
CiPaw.13G025000 Carya illinoinensis
ClCG06G000670 Citrullus lanatus
COL.COLO4_12385 Corchorus olitorius
CsaV3_6G006460 Cucumis sativus L.
DCAR_029492 Daucus carota
DCAR_029493 Daucus carota
Dinv44047 Davidia involucrata
Duzib133G0253 Durio zibethinus
ECA234G2079 Erigeron canadensis
EL10Ac1g00745 Beta vulgaris
Eucgr.E01545 Eucalyptus grandis
FAN01G1024 Fragaria x ananassa
FAN03G1287 Fragaria x ananassa
FAN06G1132 Fragaria x ananassa
FAN06G1264 Fragaria x ananassa
FAN06G2734 Fragaria x ananassa
FAN06G3851 Fragaria x ananassa
FAN06G4345 Fragaria x ananassa
FAN10G1434 Fragaria x ananassa
FvH4_7g09360 Fragaria vesca
Glyma.03G108200 Glycine max
Glyma.07G119300 Glycine max
Gohir.A08G139600 Gossypium hirsutum
Gohir.D08G160600 Gossypium hirsutum
Gorai.004G166900 Gossypium raimondii
GSVIVG01018298001 Vitis vinifera
HanXRQChr17g0562541 Helianthus annuus
Haze_02866 Corylus avellana
HPP92_020680 Vanilla planifolia
Hund17106 Selenicereus undatus
Lalb_Chr12g0210581 Lupinus albus
Lj2g0022411 Lotus japonicus
Lj3g0010513 Lotus japonicus
Lj9A554T27 Lonicera japonica
Lsat_1_v5_gn_4_39261 Lactuca sativa
Manes.05G056250 Manihot esculenta
Mapoly0044s0100 Marchantia polymorpha
MBI04_g13842_MAGBIO Magnolia biondii
MBI17_g10596_MAGBIO Magnolia biondii
MCO12G031 Micromonas commoda
MD07G1098100 Malus domestica
Medtr8g007345 Medicago truncatula
MELO3C022474.2 Cucumis melo
Migut.B01508 Erythranthe guttata
Migut.B01510 Erythranthe guttata
MSTRG.20674 Avicennia marina
Nitab4.5_0000563g0240 Nicotiana tabacum
Nitab4.5_0004837g0040 Nicotiana tabacum
Nn1g00791 Nelumbo nucifera
Oeu037443.2 Olea europaea
Os04g0544900 Oryza sativa ssp. japonica
Peaxi162Scf00853g00316 Petunia axillaris
PGR042G3832 Punica granatum
PGSC0003DMG402031172 Solanum tuberosum
Phvul.010G045600 Phaseolus vulgaris
Potri.002G139200 Populus trichocarpa
Pp3c18_21620 Physcomitrium patens
PRCOL_00003622 Prasinoderma coloniale
Prupe.2G122100 Prunus persica
Psat4g223040 Pisum sativum
Psat4g223120 Pisum sativum
PSO017G1536 Papaver somniferum
PSO837G0013 Papaver somniferum
QL04p029079 Quercus lobata
RcHm_v2.0_Chr1g0346061 Rosa chinensis
Rhsim07G0037600 Rhododendron simsii
Sabra02G0107000 Salix brachista
Sabra02G0108200 Salix brachista
Sabra02G0108400 Salix brachista
SalBow5G4694 Salvia bowleyana
Sc23g0004890 Simmondsia chinensis
Sed0013772 Sechium edule
SEGI_13726 Sequoiadendron giganteum
SGA_v2.0_scaffold340G49332 Striga asiatica
SGA_v2.0_scaffold52G19244 Striga asiatica
SHI13624 Sapria himalayana
SHI13625 Sapria himalayana
SMO117G0345 Selaginella moellendorffii
Solyc01g089900.4 Solanum lycopersicum
Sopen01g035740 Solanum pennellii
Sp1g00110 Schrenkiella parvula
TAR374G1216 Trochodendron aralioides
THA.LOC104814061 Tarenaya hassleriana
Thecc.01G397800 Theobroma cacao
Thhalv10007459m.g Eutrema salsugineum
TPR.G32127 Trifolium pratense
TPR.G39431 Trifolium pratense
TWI14G1148 Tripterygium wilfordii
unitig_8.g3848 Utricularia gibba
vmacro13511 Vaccinium macrocarpon
VMungo0331G0117 Vigna mungo
Zm00001eb075160 Zea mays

User provided reference genes

Program Settings