Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26920 Brassica napus
A05p10260 Brassica napus
Aa31LG9G15460 Aethionema arabicum
Actinidia03352 Actinidia chinensis
Actinidia06373 Actinidia chinensis
Actinidia17894 Actinidia chinensis
Actinidia17897 Actinidia chinensis
Ah.12g055390 Amaranthus hybridus
AL4G31520 Arabidopsis lyrata
Aqoxy3G02212 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q6MSMD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.USP5IX Arachis hypogaea
AT2G35470 Arabidopsis thaliana
ATR0829G134 Amborella trichopoda
Atru.chr6.1617 Acer truncatum
AUR62007342 Chenopodium quinoa
AUR62018657 Chenopodium quinoa
BcaB02g09427 Brassica carinata
BcaB06g28843 Brassica carinata
BcaC02g07713 Brassica carinata
BcaC02g11652 Brassica carinata
BolC4t22919H Brassica oleracea
BolC4t27918H Brassica oleracea
BraA04t18191Z Brassica rapa
BraA05t19966Z Brassica rapa
C04p12710 Brassica napus
C04p64310 Brassica napus
CANSAT21G1179 Cannabis sativa
CARHR129620 Cardamine hirsuta
Carub.0004s1716 Capsella rubella
Ca_25191_v3 Cicer arietinum L.
Cc08_g03420 Coffea canephora
CDE11G0669 Ceratophyllum demersum
Cfa012495 Carpinus fangiana
Ciclev10002672m.g Citrus clementina
CiPaw.11G097200 Carya illinoinensis
CiPaw.12G067200 Carya illinoinensis
ClCG09G011720 Citrullus lanatus
COL.COLO4_16960 Corchorus olitorius
Cpa.g.sc90.12 Carica papaya
CsaV3_3G048920 Cucumis sativus L.
DCAR_004283 Daucus carota
DCAR_008238 Daucus carota
Dinv25246 Davidia involucrata
Dinv28989 Davidia involucrata
Duzib084G0219 Durio zibethinus
Duzib205G0699 Durio zibethinus
ECA233G1983 Erigeron canadensis
EL10Ac5g12029 Beta vulgaris
Eucgr.E00236 Eucalyptus grandis
FAN04G1558 Fragaria x ananassa
FAN08G1932 Fragaria x ananassa
FAN13G1488 Fragaria x ananassa
FAN18G0589 Fragaria x ananassa
FAN18G2302 Fragaria x ananassa
FvH4_5g22880 Fragaria vesca
Glyma.01G015400 Glycine max
Glyma.09G207000 Glycine max
Gohir.A03G000042 Gossypium hirsutum
Gohir.A08G154500 Gossypium hirsutum
Gohir.D03G175400 Gossypium hirsutum
Gohir.D08G175100 Gossypium hirsutum
Gorai.003G184400 Gossypium raimondii
Gorai.004G183000 Gossypium raimondii
GSVIVG01013097001 Vitis vinifera
HanXRQChr02g0049381 Helianthus annuus
HanXRQChr13g0394911 Helianthus annuus
Haze_08174 Corylus avellana
Hma1.2p1_1594F.1_g292720 Hydrangea macrophylla
HPP92_020904 Vanilla planifolia
Hund11197 Selenicereus undatus
Hund14362 Selenicereus undatus
Lalb_Chr05g0215821 Lupinus albus
Lalb_Chr09g0325551 Lupinus albus
Lalb_Chr16g0381161 Lupinus albus
Lj2g0003916 Lotus japonicus
Lj8A306T66 Lonicera japonica
Lsat_1_v5_gn_6_3501 Lactuca sativa
Manes.17G010400 Manihot esculenta
MD06G1025300 Malus domestica
MD16G1281100 Malus domestica
Medtr5g029620 Medicago truncatula
MELO3C003431.2 Cucumis melo
Migut.E00776 Erythranthe guttata
MSTRG.13745 Avicennia marina
MSTRG.1998 Avicennia marina
Nitab4.5_0000127g0020 Nicotiana tabacum
Nitab4.5_0000529g0100 Nicotiana tabacum
Nn1g00185 Nelumbo nucifera
Nn3g19409 Nelumbo nucifera
Oeu019228.1 Olea europaea
Oeu028870.1 Olea europaea
Peaxi162Scf00170g00822 Petunia axillaris
PGR042G2947 Punica granatum
PGSC0003DMG400014798 Solanum tuberosum
Phvul.002G138000 Phaseolus vulgaris
Potri.001G138300 Populus trichocarpa
Potri.003G095500 Populus trichocarpa
Prupe.5G029800 Prunus persica
Psat2g138960 Pisum sativum
PSO063G4594 Papaver somniferum
PSO782G5418 Papaver somniferum
QL12p001245 Quercus lobata
RcHm_v2.0_Chr7g0211581 Rosa chinensis
Rhsim11G0019700 Rhododendron simsii
Sabra01G0107000 Salix brachista
Sabra03G0064400 Salix brachista
Sc22g0001800 Simmondsia chinensis
Sed0013517 Sechium edule
Sed0017013 Sechium edule
SGA_v2.0_scaffold20G09263 Striga asiatica
SGA_v2.0_scaffold6G03154 Striga asiatica
Solyc08g076520.3 Solanum lycopersicum
Sopen08g025100 Solanum pennellii
Sp4g17690 Schrenkiella parvula
TAR375G0881 Trochodendron aralioides
THA.LOC104798487 Tarenaya hassleriana
THA.LOC104814422 Tarenaya hassleriana
Thecc.03G308400 Theobroma cacao
Thhalv10017330m.g Eutrema salsugineum
TPR.G8109 Trifolium pratense
TWI60G1252 Tripterygium wilfordii
TWI81G0656 Tripterygium wilfordii
unitig_699.g19791 Utricularia gibba
vmacro00294 Vaccinium macrocarpon
vmacro00301 Vaccinium macrocarpon
VMungo1215G0299 Vigna mungo
Zm00001eb430030 Zea mays

User provided reference genes

Program Settings