Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p68040 Brassica napus
Aa31LG1G20710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4049__4050 Anthoceros agrestis
Actinidia30115 Actinidia chinensis
Actinidia37561 Actinidia chinensis
Ah.15g091520 Amaranthus hybridus
AL1G13730 Arabidopsis lyrata
Aqoxy5G00102 Aquilegia oxysepala
Aqoxy6G02518 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5C4SPF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GM89QY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3R5E0 Arachis hypogaea
AT1G04130 Arabidopsis thaliana
ATR0723G059 Amborella trichopoda
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum
AUR62008821 Chenopodium quinoa
AUR62025420 Chenopodium quinoa
BcaC07g42208 Brassica carinata
BcaC07g42211 Brassica carinata
BolC8t52775H Brassica oleracea
BraA09t42139Z Brassica rapa
C08p52480 Brassica napus
CAN.G119.6 Capsicum annuum
CAN.G119.7 Capsicum annuum
CANSAT01G0995 Cannabis sativa
CARHR003480 Cardamine hirsuta
Carub.0001s0328 Capsella rubella
Ca_09640_v3 Cicer arietinum L.
CBR_g36953 Chara braunii
Cc01_g17680 Coffea canephora
Cfa002496 Carpinus fangiana
Cfa024968 Carpinus fangiana
Ciclev10020743m.g Citrus clementina
CiPaw.03G272200 Carya illinoinensis
ClCG00G001600 Citrullus lanatus
ClCG07G001460 Citrullus lanatus
COL.COLO4_37372 Corchorus olitorius
Cpa.g.sc87.54 Carica papaya
Cre08.g375650 Chlamydomonas reinhardtii
CsaV3_3G028470 Cucumis sativus L.
CSS0033273 Camellia sinensis var. sinensis
DCAR_000556 Daucus carota
DCAR_000557 Daucus carota
Dinv43053 Davidia involucrata
Duzib138G0227 Durio zibethinus
ECA247G1810 Erigeron canadensis
EL10Ac7g17713 Beta vulgaris
Eucgr.A01369 Eucalyptus grandis
FAN24G1818 Fragaria x ananassa
FAN27G1100 Fragaria x ananassa
FvH4_2g20260 Fragaria vesca
Glyma.10G040900 Glycine max
Glyma.13G127800 Glycine max
Gohir.A11G134300 Gossypium hirsutum
Gohir.D11G140400 Gossypium hirsutum
Gorai.007G150600 Gossypium raimondii
GSVIVG01028451001 Vitis vinifera
HanXRQChr01g0013201 Helianthus annuus
HanXRQChr10g0280241 Helianthus annuus
Haze_24722 Corylus avellana
Hma1.2p1_2051F.1_g312575 Hydrangea macrophylla
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla
HPP92_025825 Vanilla planifolia
Hund18317 Selenicereus undatus
Lalb_Chr21g0314151 Lupinus albus
Lj1C76G7 Lonicera japonica
Lj5g0001397 Lotus japonicus
Lsat_1_v5_gn_9_11700 Lactuca sativa
Manes.13G038600 Manihot esculenta
Mapoly0012s0146 Marchantia polymorpha
MBI10_g26060_MAGBIO Magnolia biondii
MCO01G218 Micromonas commoda
MD05G1186300 Malus domestica
MD05G1186500 Malus domestica
MD10G1174200 Malus domestica
MD10G1174300 Malus domestica
MELO3C012833.2 Cucumis melo
Migut.O00355 Erythranthe guttata
MSTRG.22887 Avicennia marina
Nitab4.5_0000385g0060 Nicotiana tabacum
Nitab4.5_0000392g0100 Nicotiana tabacum
Nn1g03023 Nelumbo nucifera
Oeu058104.1 Olea europaea
Os03g0750100 Oryza sativa ssp. japonica
Peaxi162Scf00043g00235 Petunia axillaris
PGR031G0293 Punica granatum
PGSC0003DMG400007719 Solanum tuberosum
Phvul.007G154100 Phaseolus vulgaris
Potri.002G255300 Populus trichocarpa
Pp3c19_11990 Physcomitrium patens
PRCOL_00004543 Prasinoderma coloniale
Prupe.1G573100 Prunus persica
Prupe.8G213100 Prunus persica
Psat6g064440 Pisum sativum
PSO170G6901 Papaver somniferum
PSO210G7683 Papaver somniferum
QL09p042418 Quercus lobata
RcHm_v2.0_Chr6g0286031 Rosa chinensis
RcHm_v2.0_Chr6g0286041 Rosa chinensis
Rhsim13G0040700 Rhododendron simsii
Sabra02G0194000 Salix brachista
SalBow5G1930 Salvia bowleyana
Sc05g0002580 Simmondsia chinensis
Sc05g0002620 Simmondsia chinensis
Sc05g0002640 Simmondsia chinensis
Sc05g0002800 Simmondsia chinensis
Sc05g0002820 Simmondsia chinensis
Sed0025577 Sechium edule
SEGI_04783 Sequoiadendron giganteum
SEGI_25119 Sequoiadendron giganteum
SGA_v2.0_scaffold382G50403 Striga asiatica
SMO196G0213 Selaginella moellendorffii
SMO234G0002 Selaginella moellendorffii
Solyc09g064380.3 Solanum lycopersicum
Sopen09g025510 Solanum pennellii
Sp1g02950 Schrenkiella parvula
TAR349G0001 Trochodendron aralioides
TAR362G1053 Trochodendron aralioides
THA.LOC104801120 Tarenaya hassleriana
Thecc.01G247800 Theobroma cacao
Thhalv10008004m.g Eutrema salsugineum
TPR.G28794 Trifolium pratense
TWI18G1043 Tripterygium wilfordii
unitig_22.g6263 Utricularia gibba
vmacro02716 Vaccinium macrocarpon
VMungo0720G2771 Vigna mungo
Zm00001eb057360 Zea mays

User provided reference genes

Program Settings