Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39170 Brassica napus
Aa31sc661G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis
Actinidia27653 Actinidia chinensis
Actinidia30007 Actinidia chinensis
Ah.01g024240 Amaranthus hybridus
Ah.02g111080 Amaranthus hybridus
AL8G21270 Arabidopsis lyrata
Aqoxy2G00207 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea
AT5G48440 Arabidopsis thaliana
ATR0743G111 Amborella trichopoda
Atru.chr6.3536 Acer truncatum
Atru.chr6.3537 Acer truncatum
AUR62008077 Chenopodium quinoa
AUR62027071 Chenopodium quinoa
AUR62028656 Chenopodium quinoa
AUR62030912 Chenopodium quinoa
AUR62043643 Chenopodium quinoa
BcaC06g30795 Brassica carinata
BolC7t44436H Brassica oleracea
BraA06t26832Z Brassica rapa
C07p39160 Brassica napus
CAN.G120.6 Capsicum annuum
CARHR183670 Cardamine hirsuta
Carub.0008s0801 Capsella rubella
Ca_07443_v3 Cicer arietinum L.
Cc01_g16040 Coffea canephora
Cc10_g08090 Coffea canephora
Cfa010628 Carpinus fangiana
Cfa010629 Carpinus fangiana
Ciclev10015007m.g Citrus clementina
CiPaw.13G058500 Carya illinoinensis
ClCG09G007900 Citrullus lanatus
COL.COLO4_06929 Corchorus olitorius
Cpa.g.sc8.59 Carica papaya
Cre07.g346800 Chlamydomonas reinhardtii
Cre16.g690767 Chlamydomonas reinhardtii
CsaV3_7G027170 Cucumis sativus L.
CSS0007769 Camellia sinensis var. sinensis
DCAR_000507 Daucus carota
Dinv10448 Davidia involucrata
Duzib211G0163 Durio zibethinus
ECA236G0779 Erigeron canadensis
EL10Ac5g10598 Beta vulgaris
Eucgr.H00714 Eucalyptus grandis
FAN15G1742 Fragaria x ananassa
FAN27G0099 Fragaria x ananassa
FvH4_2g17671 Fragaria vesca
Glyma.08G343200 Glycine max
Gohir.A11G143100 Gossypium hirsutum
Gohir.D11G149400 Gossypium hirsutum
Gorai.007G160200 Gossypium raimondii
GSVIVG01003799001 Vitis vinifera
HanXRQChr09g0257591 Helianthus annuus
HanXRQChr09g0257621 Helianthus annuus
Haze_03570 Corylus avellana
Haze_03572 Corylus avellana
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla
HPP92_002705 Vanilla planifolia
HPP92_002706 Vanilla planifolia
HPP92_002746 Vanilla planifolia
HPP92_002747 Vanilla planifolia
Hund09342 Selenicereus undatus
Hund09476 Selenicereus undatus
Lalb_Chr19g0126211 Lupinus albus
Lj1g0017122 Lotus japonicus
Lj2C1115T10 Lonicera japonica
Lsat_1_v5_gn_8_97700 Lactuca sativa
Manes.12G059400 Manihot esculenta
Mapoly0020s0122 Marchantia polymorpha
MBI11_g40786_MAGBIO Magnolia biondii
MBI11_g40788_MAGBIO Magnolia biondii
MD05G1157000 Malus domestica
Medtr7g051240 Medicago truncatula
MELO3C015716.2 Cucumis melo
MELO3C029187.2 Cucumis melo
Migut.D00744 Erythranthe guttata
MSTRG.18500 Avicennia marina
Nitab4.5_0000038g0330 Nicotiana tabacum
Nitab4.5_0002518g0020 Nicotiana tabacum
Nn1g09591 Nelumbo nucifera
Oeu051516.1 Olea europaea
Os09g0514100 Oryza sativa ssp. japonica
Peaxi162Scf00672g00017 Petunia axillaris
PGR083G1941 Punica granatum
Phvul.008G135100 Phaseolus vulgaris
Phvul.008G135200 Phaseolus vulgaris
Phvul.L001686 Phaseolus vulgaris
Potri.014G018300 Populus trichocarpa
Potri.014G177300 Populus trichocarpa
Pp3c13_24490 Physcomitrium patens
Pp3c23_1170 Physcomitrium patens
Prupe.8G189100 Prunus persica
Prupe.8G189200 Prunus persica
Psat0s4407g0040 Pisum sativum
Psat3g151720 Pisum sativum
Psat7g213000 Pisum sativum
PSO210G2735 Papaver somniferum
PSO832G1370 Papaver somniferum
QL09p047008 Quercus lobata
QL09p047023 Quercus lobata
RcHm_v2.0_Chr6g0282641 Rosa chinensis
Rhsim13G0053400 Rhododendron simsii
Sabra14G0135500 Salix brachista
SalBow6G6469 Salvia bowleyana
Sc17g0001620 Simmondsia chinensis
Sed0024966 Sechium edule
SEGI_16048 Sequoiadendron giganteum
SEGI_17774 Sequoiadendron giganteum
SEGI_39676 Sequoiadendron giganteum
SGA_v2.0_scaffold566G52950 Striga asiatica
SMO364G0271 Selaginella moellendorffii
Solyc09g055910.3 Solanum lycopersicum
Sopen09g021740 Solanum pennellii
Sp2g18790 Schrenkiella parvula
TAR362G0101 Trochodendron aralioides
THA.LOC104802642 Tarenaya hassleriana
Thecc.01G209900 Theobroma cacao
Thhalv10004189m.g Eutrema salsugineum
TPR.G26855 Trifolium pratense
TWI36G0048 Tripterygium wilfordii
unitig_736.g22899 Utricularia gibba
vmacro02824 Vaccinium macrocarpon
VMungo1383G1750 Vigna mungo
VMungo1383G3498 Vigna mungo
Zm00001eb318320 Zea mays

User provided reference genes

Program Settings