Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p24860 Brassica napus
A09p52120 Brassica napus
Aa31LG10G14080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis
Actinidia25944 Actinidia chinensis
Ah.12g053650 Amaranthus hybridus
AL5G41940 Arabidopsis lyrata
Aqoxy1G03814 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea
AT3G59840 Arabidopsis thaliana
ATR1088G052 Amborella trichopoda
Atru.chr6.1773 Acer truncatum
AUR62007231 Chenopodium quinoa
AUR62018769 Chenopodium quinoa
AUR62023555 Chenopodium quinoa
BcaB02g07441 Brassica carinata
BcaC07g40434 Brassica carinata
BcaC07g40556 Brassica carinata
BcaC08g45013 Brassica carinata
BolC6t37808H Brassica oleracea
BraA07t30130Z Brassica rapa
C06p26450 Brassica napus
CAN.G799.18 Capsicum annuum
CANSAT64G2368 Cannabis sativa
CARHR170180 Cardamine hirsuta
Carub.0005s2656 Capsella rubella
Ca_24632_v3 Cicer arietinum L.
CBR_g8168 Chara braunii
Cc00_g23310 Coffea canephora
Cc00_g26570 Coffea canephora
Cc00_g30230 Coffea canephora
Cc00_g31810 Coffea canephora
Cc08_g01810 Coffea canephora
Cc08_g01910 Coffea canephora
Cc08_g01990 Coffea canephora
Cc08_g02050 Coffea canephora
CDE05G1960 Ceratophyllum demersum
Cfa012386 Carpinus fangiana
Ciclev10033154m.g Citrus clementina
CiPaw.11G087500 Carya illinoinensis
COL.COLO4_17110 Corchorus olitorius
Cpa.g.sc6.409 Carica papaya
CsaV3_3G049530 Cucumis sativus L.
CSS0031892 Camellia sinensis var. sinensis
CSS0033989 Camellia sinensis var. sinensis
CSS0037645 Camellia sinensis var. sinensis
DCAR_008300 Daucus carota
Dinv28915 Davidia involucrata
Duzib068G0126 Durio zibethinus
Duzib084G1370 Durio zibethinus
Duzib205G0278 Durio zibethinus
ECA240G0414 Erigeron canadensis
EL10Ac5g12195 Beta vulgaris
Eucgr.C01972 Eucalyptus grandis
Eucgr.E00313 Eucalyptus grandis
FAN04G1051 Fragaria x ananassa
FAN08G0099 Fragaria x ananassa
FAN13G1034 Fragaria x ananassa
FAN18G0540 Fragaria x ananassa
Glyma.01G201200 Glycine max
Glyma.11G041000 Glycine max
Gohir.A04G000300 Gossypium hirsutum
Gohir.A08G159600 Gossypium hirsutum
Gohir.D08G180000 Gossypium hirsutum
Gohir.D12G213400 Gossypium hirsutum
Gorai.004G188500 Gossypium raimondii
Gorai.008G229000 Gossypium raimondii
GSVIVG01013230001 Vitis vinifera
HanXRQChr08g0234831 Helianthus annuus
Haze_08298 Corylus avellana
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla
Lalb_Chr09g0323941 Lupinus albus
Lj2g0021118 Lotus japonicus
Lsat_1_v5_gn_6_66400 Lactuca sativa
Manes.15G173000 Manihot esculenta
Mapoly0046s0110 Marchantia polymorpha
Mapoly0127s0016 Marchantia polymorpha
MBI11_g07528_MAGBIO Magnolia biondii
MD16G1269400 Malus domestica
Medtr5g013975 Medicago truncatula
MELO3C003373.2 Cucumis melo
Migut.E01523 Erythranthe guttata
Migut.E01526 Erythranthe guttata
Migut.N01790 Erythranthe guttata
Nitab4.5_0002055g0120 Nicotiana tabacum
Nitab4.5_0006693g0020 Nicotiana tabacum
Nn1g03717 Nelumbo nucifera
Nn1g08520 Nelumbo nucifera
Oeu006551.1 Olea europaea
Oeu014592.2 Olea europaea
Os05g0500450 Oryza sativa ssp. japonica
Peaxi162Scf00084g00099 Petunia axillaris
PGR042G3581 Punica granatum
PGSC0003DMG400024214 Solanum tuberosum
Phvul.002G003700 Phaseolus vulgaris
Phvul.002G004500 Phaseolus vulgaris
Potri.001G146700 Populus trichocarpa
Pp3c14_9970 Physcomitrium patens
Prupe.5G046200 Prunus persica
Psat2g174760 Pisum sativum
PSO210G4997 Papaver somniferum
PSO832G1675 Papaver somniferum
QL12p007107 Quercus lobata
RcHm_v2.0_Chr7g0208331 Rosa chinensis
Rhsim11G0011100 Rhododendron simsii
Sabra01G0115400 Salix brachista
SalBow1G7863 Salvia bowleyana
Sc01g0007760 Simmondsia chinensis
Sed0004723 Sechium edule
Sed0016057 Sechium edule
SGA_v2.0_scaffold163G38077 Striga asiatica
SMO119G0374 Selaginella moellendorffii
Solyc08g077280.1 Solanum lycopersicum
Sopen05g026900 Solanum pennellii
Sopen08g025860 Solanum pennellii
Sp5g03300 Schrenkiella parvula
TAR624G0346 Trochodendron aralioides
THA.LOC104819961 Tarenaya hassleriana
Thecc.03G234100 Theobroma cacao
Thhalv10006335m.g Eutrema salsugineum
TPR.G6747 Trifolium pratense
TPR.G6988 Trifolium pratense
TWI15G0656 Tripterygium wilfordii
TWI81G0993 Tripterygium wilfordii
unitig_747.g21291 Utricularia gibba
VMungo1215G1228 Vigna mungo
VMungo1215G3393 Vigna mungo

User provided reference genes

Program Settings