Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12170 Brassica napus
Aa31LG6G2850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1434 Anthoceros agrestis
Actinidia29243 Actinidia chinensis
Ah.14g085060 Amaranthus hybridus
AL7G33390 Arabidopsis lyrata
Aqoxy1G01513 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4Q5DUA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5RXD5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FHXA43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HZ123V Arachis hypogaea
AT4G20760 Arabidopsis thaliana
ATR0763G139 Amborella trichopoda
Atru.chr10.686 Acer truncatum
AUR62027598 Chenopodium quinoa
AUR62030247 Chenopodium quinoa
BcaC09g51315 Brassica carinata
BcaNung04155 Brassica carinata
BolC1t01404H Brassica oleracea
BraA01t01159Z Brassica rapa
C01p14490 Brassica napus
CAN.G565.1 Capsicum annuum
CANSAT35G1316 Cannabis sativa
CARHR227300 Cardamine hirsuta
Carub.0007s2069 Capsella rubella
Ca_00927_v3 Cicer arietinum L.
Cc09_g07340 Coffea canephora
CDE02G2479 Ceratophyllum demersum
CDE02G4223 Ceratophyllum demersum
CDE02G4463 Ceratophyllum demersum
CDE06G1095 Ceratophyllum demersum
Cfa000769 Carpinus fangiana
Cfa026333 Carpinus fangiana
Ciclev10016184m.g Citrus clementina
CiPaw.09G147800 Carya illinoinensis
ClCG03G008560 Citrullus lanatus
COL.COLO4_26883 Corchorus olitorius
Cpa.g.c30210.1 Carica papaya
Cre12.g549852 Chlamydomonas reinhardtii
Cre16.g675450 Chlamydomonas reinhardtii
CsaV3_1G037630 Cucumis sativus L.
CSS0031891 Camellia sinensis var. sinensis
DCAR_005641 Daucus carota
Dinv06442 Davidia involucrata
Duzib235G1073 Durio zibethinus
ECA234G0756 Erigeron canadensis
EL10Ac9g22332 Beta vulgaris
Eucgr.D01017 Eucalyptus grandis
FAN16G1953 Fragaria x ananassa
FAN21G1916 Fragaria x ananassa
FAN25G1707 Fragaria x ananassa
FvH4_3g11150 Fragaria vesca
Glyma.09G029700 Glycine max
Glyma.15G135500 Glycine max
Gohir.A03G088500 Gossypium hirsutum
Gohir.D02G105200 Gossypium hirsutum
Gorai.005G119400 Gossypium raimondii
GSVIVG01021771001 Vitis vinifera
HanXRQChr10g0296271 Helianthus annuus
Haze_05946 Corylus avellana
Hma1.2p1_1192F.1_g265520 Hydrangea macrophylla
Hma1.2p1_1192F.1_g265540 Hydrangea macrophylla
HPP92_015692 Vanilla planifolia
HPP92_015693 Vanilla planifolia
Hund17667 Selenicereus undatus
Lalb_Chr18g0058331 Lupinus albus
Lj2A337T31 Lonicera japonica
Lj6g0027485 Lotus japonicus
Lsat_1_v5_gn_5_148401 Lactuca sativa
Manes.14G126200 Manihot esculenta
Mapoly0158s0008 Marchantia polymorpha
MBI18_g27139_MAGBIO Magnolia biondii
MCO02G010 Micromonas commoda
MCO03G468 Micromonas commoda
MCO04G545 Micromonas commoda
MCO08G164 Micromonas commoda
MCO09G279 Micromonas commoda
MD10G1243100 Malus domestica
Medtr2g031990 Medicago truncatula
MELO3C002872.2 Cucumis melo
Migut.M01928 Erythranthe guttata
MSTRG.16306 Avicennia marina
Nitab4.5_0002819g0010 Nicotiana tabacum
Nitab4.5_0010673g0010 Nicotiana tabacum
Nn7g37778 Nelumbo nucifera
Oeu063153.2 Olea europaea
Os12g0609500 Oryza sativa ssp. japonica
Peaxi162Scf00395g00112 Petunia axillaris
PGSC0003DMG400028033 Solanum tuberosum
Phvul.006G123300 Phaseolus vulgaris
Potri.011G157300 Populus trichocarpa
Pp3c10_7720 Physcomitrium patens
PRCOL_00002389 Prasinoderma coloniale
PRCOL_00004206 Prasinoderma coloniale
PRCOL_00006144 Prasinoderma coloniale
PRCOL_00006510 Prasinoderma coloniale
Prupe.4G101000 Prunus persica
Psat1g164320 Pisum sativum
PSO541G1785 Papaver somniferum
PSO541G6221 Papaver somniferum
PSO675G7004 Papaver somniferum
QL04p073045 Quercus lobata
QL04p073052 Quercus lobata
RcHm_v2.0_Chr5g0018051 Rosa chinensis
Rhsim13G0125300 Rhododendron simsii
Sabra11G0142800 Salix brachista
SalBow8G0058 Salvia bowleyana
SalBow8G0354 Salvia bowleyana
Sc24g0002570 Simmondsia chinensis
Sed0000978 Sechium edule
SEGI_07893 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00293 Striga asiatica
SMO116G0118 Selaginella moellendorffii
Solyc02g023990.3 Solanum lycopersicum
Sopen02g006700 Solanum pennellii
Sp7g18830 Schrenkiella parvula
SpUn1298_0010 Schrenkiella parvula
TAR626G0344 Trochodendron aralioides
Thecc.06G008600 Theobroma cacao
Thhalv10025851m.g Eutrema salsugineum
TPR.G21393 Trifolium pratense
TPR.G8020 Trifolium pratense
TPR.G8023 Trifolium pratense
TWI38G1238 Tripterygium wilfordii
unitig_92.g28182 Utricularia gibba
vmacro03465 Vaccinium macrocarpon
VMungo0540G1817 Vigna mungo
Zm00001eb031410 Zea mays

User provided reference genes

Program Settings