Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p29430 Brassica napus
Aa31LG9G14980 Aethionema arabicum
Actinidia22605 Actinidia chinensis
Ah.05g168900 Amaranthus hybridus
AL6G43320 Arabidopsis lyrata
Aqoxy2G01750 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea
AT4G09680 Arabidopsis thaliana
ATR0225G007 Amborella trichopoda
Atru.chr13.613 Acer truncatum
AUR62031379 Chenopodium quinoa
BcaB01g01419 Brassica carinata
BcaC04g20947 Brassica carinata
BolC9t56593H Brassica oleracea
BraA09t38510Z Brassica rapa
C09p37620 Brassica napus
CAN.G210.12 Capsicum annuum
CANSAT64G1322 Cannabis sativa
CARHR260630 Cardamine hirsuta
Carub.0006s2813 Capsella rubella
Ca_05108_v3 Cicer arietinum L.
Cc00_g16120 Coffea canephora
CDE02G1449 Ceratophyllum demersum
Cfa018501 Carpinus fangiana
Ciclev10003312m.g Citrus clementina
Ciclev10003565m.g Citrus clementina
CiPaw.15G064200 Carya illinoinensis
ClCG05G019560 Citrullus lanatus
COL.COLO4_26443 Corchorus olitorius
Cpa.g.c37201 Carica papaya
Cpa.g.sc376.1 Carica papaya
CsaV3_4G034020 Cucumis sativus L.
DCAR_012766 Daucus carota
Dinv00354 Davidia involucrata
Dinv35991 Davidia involucrata
Duzib093G2194 Durio zibethinus
ECA232G1194 Erigeron canadensis
EL10Ac1g01812 Beta vulgaris
Eucgr.F02378 Eucalyptus grandis
FAN08G0368 Fragaria x ananassa
FAN10G2690 Fragaria x ananassa
FAN16G1533 Fragaria x ananassa
FAN17G1630 Fragaria x ananassa
FAN18G2601 Fragaria x ananassa
FAN19G0764 Fragaria x ananassa
FAN19G3122 Fragaria x ananassa
FvH4_5g30300 Fragaria vesca
Glyma.08G236800 Glycine max
Gohir.A05G016750 Gossypium hirsutum
Gohir.D05G017700 Gossypium hirsutum
Gorai.009G018100 Gossypium raimondii
GSVIVG01009571001 Vitis vinifera
GSVIVG01009572001 Vitis vinifera
HanXRQChr09g0268131 Helianthus annuus
Haze_17575 Corylus avellana
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla
Hma1.2p1_2764F.1_g328150 Hydrangea macrophylla
HPP92_010556 Vanilla planifolia
HPP92_010557 Vanilla planifolia
Hund17608 Selenicereus undatus
Lalb_Chr04g0264181 Lupinus albus
Lalb_Chr04g0264191 Lupinus albus
Lalb_Chr04g0264211 Lupinus albus
Lalb_Chr04g0264221 Lupinus albus
Lalb_Chr04g0264231 Lupinus albus
Lj3g0019378 Lotus japonicus
Lj4A50G37 Lonicera japonica
Lsat_1_v5_gn_4_124380 Lactuca sativa
Manes.05G170000 Manihot esculenta
Mapoly0037s0065 Marchantia polymorpha
MBI11_g06127_MAGBIO Magnolia biondii
MBI16_g27588_MAGBIO Magnolia biondii
MBI16_g32432_MAGBIO Magnolia biondii
MD08G1060500 Malus domestica
MELO3C032401.2 Cucumis melo
Migut.C00612 Erythranthe guttata
MSTRG.25113 Avicennia marina
Nitab4.5_0001611g0140 Nicotiana tabacum
Nitab4.5_0001611g0150 Nicotiana tabacum
Nitab4.5_0003237g0010 Nicotiana tabacum
Nitab4.5_0003237g0020 Nicotiana tabacum
Nn6g32369 Nelumbo nucifera
Oeu032242.1 Olea europaea
Oeu033637.2 Olea europaea
Os09g0376000 Oryza sativa ssp. japonica
Peaxi162Scf00929g00711 Petunia axillaris
PGR031G1311 Punica granatum
PGSC0003DMG400031482 Solanum tuberosum
Phvul.011G175100 Phaseolus vulgaris
Potri.002G129000 Populus trichocarpa
Pp3c12_3560 Physcomitrium patens
Prupe.1G390200 Prunus persica
Psat4g135680 Pisum sativum
PSO541G3468 Papaver somniferum
PSO675G0403 Papaver somniferum
QL02p006174 Quercus lobata
RcHm_v2.0_Chr7g0224651 Rosa chinensis
Rhsim06G0045000 Rhododendron simsii
Sabra02G0101100 Salix brachista
SalBow7G1322 Salvia bowleyana
Sc15g0006450 Simmondsia chinensis
Sc15g0006460 Simmondsia chinensis
Sed0017871 Sechium edule
SEGI_19792 Sequoiadendron giganteum
SEGI_31096 Sequoiadendron giganteum
SEGI_35767 Sequoiadendron giganteum
SGA_v2.0_scaffold217G42430 Striga asiatica
SHI08237 Sapria himalayana
SMO356G0287 Selaginella moellendorffii
Solyc07g021115.1 Solanum lycopersicum
Solyc07g021120.3 Solanum lycopersicum
Solyc12g062480.3 Solanum lycopersicum
Sopen07g009980 Solanum pennellii
Sopen12g025610 Solanum pennellii
Sp6g07920 Schrenkiella parvula
THA.LOC104816122 Tarenaya hassleriana
Thecc.08G014800 Theobroma cacao
Thhalv10029299m.g Eutrema salsugineum
TPR.G9412 Trifolium pratense
TWI36G0305 Tripterygium wilfordii
TWI56G0571 Tripterygium wilfordii
unitig_19.g30005 Utricularia gibba
unitig_19.g30006 Utricularia gibba
unitig_8.g5014 Utricularia gibba
vmacro21568 Vaccinium macrocarpon
VMungo1127G0903 Vigna mungo
Zm00001eb311480 Zea mays

User provided reference genes

Program Settings