Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39590 Brassica napus
A06p00540 Brassica napus
A08p01210 Brassica napus
Aa31LG10G1290 Aethionema arabicum
Aa31LG8G1260 Aethionema arabicum
Actinidia26022 Actinidia chinensis
Ah.08g216920 Amaranthus hybridus
AL1G62840 Arabidopsis lyrata
AL3G26260 Arabidopsis lyrata
Aqoxy2G03952 Aquilegia oxysepala
AT1G54120 Arabidopsis thaliana
AT3G14060 Arabidopsis thaliana
Atru.chr1.4004 Acer truncatum
Atru.chr1.4021 Acer truncatum
BcaB02g10861 Brassica carinata
BcaB04g17025 Brassica carinata
BcaB07g33263 Brassica carinata
BcaC01g01436 Brassica carinata
BcaC08g43592 Brassica carinata
BcaC08g44161 Brassica carinata
BcaNung04891 Brassica carinata
BcaNung06452 Brassica carinata
BolC1t05004H Brassica oleracea
BolC3t21519H Brassica oleracea
BolC6t36062H Brassica oleracea
BolC6t36752H Brassica oleracea
BraA01t03999Z Brassica rapa
BraA06t23268Z Brassica rapa
BraA08t32172Z Brassica rapa
C01p50530 Brassica napus
C03p92010 Brassica napus
C06p09900 Brassica napus
C06p15630 Brassica napus
CANSAT56G3952 Cannabis sativa
CARHR044470 Cardamine hirsuta
CARHR088900 Cardamine hirsuta
Carub.0001s4336 Capsella rubella
Carub.0003s1365 Capsella rubella
Ca_23393_v3 Cicer arietinum L.
CDE07G1640 Ceratophyllum demersum
Cfa003523 Carpinus fangiana
Ciclev10027265m.g Citrus clementina
CiPaw.01G217500 Carya illinoinensis
ClCG07G014560 Citrullus lanatus
COL.COLO4_30741 Corchorus olitorius
Cpa.g.c40357 Carica papaya
CsaV3_3G030710 Cucumis sativus L.
DCAR_022691 Daucus carota
Dinv20423 Davidia involucrata
Dinv37860 Davidia involucrata
Duzib192G0929 Durio zibethinus
ECA234G1437 Erigeron canadensis
EL10Ac7g16423 Beta vulgaris
FAN05G0172 Fragaria x ananassa
FAN09G3283 Fragaria x ananassa
FAN14G1476 Fragaria x ananassa
FvH4_6g34980 Fragaria vesca
Glyma.07G040000 Glycine max
Glyma.16G008800 Glycine max
Gohir.A05G139800 Gossypium hirsutum
Gohir.A10G054700 Gossypium hirsutum
Gohir.D05G142000 Gossypium hirsutum
Gohir.D10G056700 Gossypium hirsutum
Gorai.009G146100 Gossypium raimondii
Gorai.011G060500 Gossypium raimondii
HanXRQChr12g0360401 Helianthus annuus
Haze_16045 Corylus avellana
Lalb_Chr04g0261121 Lupinus albus
Lalb_Chr04g0263581 Lupinus albus
Lalb_Chr14g0361931 Lupinus albus
Lj3g0022886 Lotus japonicus
Lsat_1_v5_gn_4_94161 Lactuca sativa
Lsat_1_v5_gn_5_136361 Lactuca sativa
Manes.04G145900 Manihot esculenta
MBI13_g35417_MAGBIO Magnolia biondii
MBI19_g09833_MAGBIO Magnolia biondii
MD09G1180800 Malus domestica
MD17G1166900 Malus domestica
Medtr8g021025 Medicago truncatula
MELO3C022667.2 Cucumis melo
Migut.D00934 Erythranthe guttata
Migut.I01087 Erythranthe guttata
MSTRG.10943 Avicennia marina
MSTRG.10944 Avicennia marina
Nitab4.5_0000189g0110 Nicotiana tabacum
Nitab4.5_0000255g0320 Nicotiana tabacum
Nitab4.5_0005192g0040 Nicotiana tabacum
Nitab4.5_0010678g0020 Nicotiana tabacum
Nn8g38624 Nelumbo nucifera
Oeu000400.1 Olea europaea
Oeu043644.1 Olea europaea
Peaxi162Scf00038g02015 Petunia axillaris
PGR102G2654 Punica granatum
PGSC0003DMG400004373 Solanum tuberosum
PGSC0003DMG400004890 Solanum tuberosum
PGSC0003DMG400022907 Solanum tuberosum
Phvul.010G128700 Phaseolus vulgaris
Potri.001G167600 Populus trichocarpa
Potri.003G067200 Populus trichocarpa
Prupe.3G039100 Prunus persica
Psat4g168640 Pisum sativum
PSO063G0286 Papaver somniferum
PSO421G0391 Papaver somniferum
QL05p004031 Quercus lobata
RcHm_v2.0_Chr2g0146001 Rosa chinensis
Rhsim12G0210400 Rhododendron simsii
Rhsim12G0210800 Rhododendron simsii
Sabra03G0039100 Salix brachista
SalBow6G3428 Salvia bowleyana
Sc12g0010640 Simmondsia chinensis
Sed0000884 Sechium edule
Sed0005659 Sechium edule
SGA_v2.0_scaffold122G33347 Striga asiatica
SGA_v2.0_scaffold4G02067 Striga asiatica
Solyc06g062930.1 Solanum lycopersicum
Sopen03g041090 Solanum pennellii
Sopen06g022380 Solanum pennellii
Sp1g40570 Schrenkiella parvula
Sp3g12300 Schrenkiella parvula
TAR624G0214 Trochodendron aralioides
THA.LOC104810370 Tarenaya hassleriana
THA.LOC104822658 Tarenaya hassleriana
Thecc.06G122200 Theobroma cacao
Thhalv10011868m.g Eutrema salsugineum
Thhalv10021772m.g Eutrema salsugineum
TPR.G16753 Trifolium pratense
TWI75G0921 Tripterygium wilfordii
vmacro22033 Vaccinium macrocarpon

User provided reference genes

Program Settings