Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12100 Brassica napus
Aa31LG7G650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis
Actinidia36860 Actinidia chinensis
Ah.09g231760 Amaranthus hybridus
AL1G28240 Arabidopsis lyrata
Aqoxy6G02563 Aquilegia oxysepala
Aqoxy7G02339 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea
AT1G16080 Arabidopsis thaliana
ATR0580G215 Amborella trichopoda
Atru.chr1.2816 Acer truncatum
AUR62002650 Chenopodium quinoa
AUR62034059 Chenopodium quinoa
BcaB02g06590 Brassica carinata
BcaC05g25605 Brassica carinata
BolC5t30159H Brassica oleracea
BraA06t24379Z Brassica rapa
C05p14280 Brassica napus
CAN.G1008.12 Capsicum annuum
CANSAT64G1829 Cannabis sativa
CARHR016590 Cardamine hirsuta
Carub.0001s1588 Capsella rubella
CBR_g3722 Chara braunii
CBR_g39222 Chara braunii
Cc04_g05360 Coffea canephora
CDE04G3654 Ceratophyllum demersum
CDE07G0158 Ceratophyllum demersum
Cfa001846 Carpinus fangiana
Ciclev10025944m.g Citrus clementina
CiPaw.01G256900 Carya illinoinensis
ClCG09G003450 Citrullus lanatus
COL.COLO4_26789 Corchorus olitorius
Cpa.g.sc95.67 Carica papaya
Cre03.g167050 Chlamydomonas reinhardtii
Cre10.g435850 Chlamydomonas reinhardtii
CsaV3_7G031750 Cucumis sativus L.
CSS0033272 Camellia sinensis var. sinensis
CSS0034221 Camellia sinensis var. sinensis
Dinv21434 Davidia involucrata
Duzib235G0222 Durio zibethinus
ECA232G3902 Erigeron canadensis
EL10Ac8g19420 Beta vulgaris
Eucgr.F03988 Eucalyptus grandis
FAN05G3051 Fragaria x ananassa
FAN09G0753 Fragaria x ananassa
FAN14G3270 Fragaria x ananassa
FvH4_6g28180 Fragaria vesca
Glyma.07G020900 Glycine max
Glyma.08G220900 Glycine max
Gohir.A05G117000 Gossypium hirsutum
Gohir.D05G117900 Gossypium hirsutum
Gorai.009G121800 Gossypium raimondii
GSVIVG01016093001 Vitis vinifera
HanXRQChr16g0499491 Helianthus annuus
HanXRQChr16g0499501 Helianthus annuus
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla
HPP92_021945 Vanilla planifolia
Hund22405 Selenicereus undatus
Lalb_Chr25g0278721 Lupinus albus
Lj3g0005429 Lotus japonicus
Lj5C82T4 Lonicera japonica
Lsat_1_v5_gn_4_84921 Lactuca sativa
Manes.11G069800 Manihot esculenta
Mapoly0047s0137 Marchantia polymorpha
MBI14_g16440_MAGBIO Magnolia biondii
MCO15G348 Micromonas commoda
MCO15G666 Micromonas commoda
MD09G1228700 Malus domestica
MD17G1227100 Malus domestica
Medtr4g007910 Medicago truncatula
MELO3C023482.2 Cucumis melo
Migut.D01148 Erythranthe guttata
MSTRG.9390 Avicennia marina
Nitab4.5_0002700g0080 Nicotiana tabacum
Nitab4.5_0004738g0050 Nicotiana tabacum
Nn2g12468 Nelumbo nucifera
Nn5g31109 Nelumbo nucifera
Oeu003115.1 Olea europaea
Oeu003116.1 Olea europaea
Os08g0266300 Oryza sativa ssp. japonica
Peaxi162Scf00314g01040 Petunia axillaris
PGR102G1595 Punica granatum
PGSC0003DMG400014158 Solanum tuberosum
Phvul.008G253700 Phaseolus vulgaris
Phvul.009G155700 Phaseolus vulgaris
Potri.001G040100 Populus trichocarpa
Potri.001G041140 Populus trichocarpa
Potri.003G185501 Populus trichocarpa
Potri.003G185754 Populus trichocarpa
Potri.003G185901 Populus trichocarpa
Pp3c1_40240 Physcomitrium patens
PRCOL_00003410 Prasinoderma coloniale
PRCOL_00006061 Prasinoderma coloniale
Prupe.3G104600 Prunus persica
Psat7g260440 Pisum sativum
PSO017G5952 Papaver somniferum
PSO170G6342 Papaver somniferum
QL05p037111 Quercus lobata
QL05p037113 Quercus lobata
RcHm_v2.0_Chr2g0132161 Rosa chinensis
RcHm_v2.0_Chr2g0132191 Rosa chinensis
RcHm_v2.0_Chr2g0132221 Rosa chinensis
Rhsim12G0183500 Rhododendron simsii
Rhsim12G0183600 Rhododendron simsii
Sabra03G0135700 Salix brachista
SalBow1G2136 Salvia bowleyana
Sc10g0006500 Simmondsia chinensis
Sed0008158 Sechium edule
SEGI_00638 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24604 Striga asiatica
SMO356G0223 Selaginella moellendorffii
Solyc03g117740.3 Solanum lycopersicum
Sopen03g036650 Solanum pennellii
Sp1g14390 Schrenkiella parvula
TAR626G1848 Trochodendron aralioides
THA.LOC104812426 Tarenaya hassleriana
Thecc.06G048100 Theobroma cacao
Thhalv10008259m.g Eutrema salsugineum
TWI12G1342 Tripterygium wilfordii
unitig_62.g23820 Utricularia gibba
vmacro16838 Vaccinium macrocarpon
VMungo0647G1588 Vigna mungo
VMungo1309G0227 Vigna mungo
Zm00001eb177930 Zea mays

User provided reference genes

Program Settings