Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p18550 Brassica napus
Aa31LG2G18680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2498 Anthoceros agrestis
Actinidia22269 Actinidia chinensis
Ah.10g024890 Amaranthus hybridus
AL7G20440 Arabidopsis lyrata
Aqoxy7G03190 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IM7VUN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQZ49N Arachis hypogaea
AT4G31600 Arabidopsis thaliana
ATR0580G193 Amborella trichopoda
Atru.chr7.2611 Acer truncatum
AUR62020293 Chenopodium quinoa
AUR62037706 Chenopodium quinoa
BcaB03g12708 Brassica carinata
BcaC01g01078 Brassica carinata
BolC3t21091H Brassica oleracea
BraA08t33817Z Brassica rapa
C03p87780 Brassica napus
CAN.G947.12 Capsicum annuum
CANSAT21G0300 Cannabis sativa
CARHR239480 Cardamine hirsuta
Carub.0007s0897 Capsella rubella
Ca_15645_v3 Cicer arietinum L.
CBR_g12209 Chara braunii
CBR_g30245 Chara braunii
CBR_g4355 Chara braunii
Cc08_g06570 Coffea canephora
CDE05G0069 Ceratophyllum demersum
Cfa013294 Carpinus fangiana
Ciclev10008929m.g Citrus clementina
CiPaw.07G210800 Carya illinoinensis
CiPaw.08G021000 Carya illinoinensis
ClCG08G012590 Citrullus lanatus
COL.COLO4_19013 Corchorus olitorius
Cpa.g.sc23.39 Carica papaya
Cre16.g666250 Chlamydomonas reinhardtii
Cre17.g703250 Chlamydomonas reinhardtii
CsaV3_2G031310 Cucumis sativus L.
CSS0000832 Camellia sinensis var. sinensis
CSS0007887 Camellia sinensis var. sinensis
DCAR_000684 Daucus carota
Dinv04088 Davidia involucrata
Duzib168G2215 Durio zibethinus
ECA240G4065 Erigeron canadensis
EL10Ac2g02421 Beta vulgaris
Eucgr.C04017 Eucalyptus grandis
FvH4_2g36601 Fragaria vesca
Glyma.04G076600 Glycine max
Glyma.06G077800 Glycine max
Gohir.A07G034748 Gossypium hirsutum
Gohir.D07G038400 Gossypium hirsutum
Gorai.001G040400 Gossypium raimondii
GSVIVG01033167001 Vitis vinifera
HanXRQChr03g0081901 Helianthus annuus
HanXRQChr17g0547151 Helianthus annuus
Haze_21771 Corylus avellana
Hma1.2p1_0102F.1_g049850 Hydrangea macrophylla
HPP92_015840 Vanilla planifolia
HPP92_015853 Vanilla planifolia
Hund02966 Selenicereus undatus
Lalb_Chr23g0269201 Lupinus albus
Lj1g0019857 Lotus japonicus
Lj8A479G58 Lonicera japonica
Lj8C450G4 Lonicera japonica
Lsat_1_v5_gn_5_46160 Lactuca sativa
Manes.03G005300 Manihot esculenta
Mapoly0006s0268 Marchantia polymorpha
Mapoly0009s0233 Marchantia polymorpha
MBI14_g30706_MAGBIO Magnolia biondii
MCO11G920 Micromonas commoda
MD08G1126100 Malus domestica
MD15G1105900 Malus domestica
Medtr3g109070 Medicago truncatula
MELO3C011179.2 Cucumis melo
Migut.E01428 Erythranthe guttata
Migut.E01429 Erythranthe guttata
MSTRG.1617 Avicennia marina
Nitab4.5_0001159g0150 Nicotiana tabacum
Nitab4.5_0003963g0030 Nicotiana tabacum
Nn2g12600 Nelumbo nucifera
Nn8g40282 Nelumbo nucifera
Oeu008771.1 Olea europaea
Os06g0188100 Oryza sativa ssp. japonica
Peaxi162Scf00459g00842 Petunia axillaris
PGR044G1574 Punica granatum
PGSC0003DMG400029372 Solanum tuberosum
Phvul.009G102300 Phaseolus vulgaris
Potri.006G270700 Populus trichocarpa
Potri.018G009400 Populus trichocarpa
Pp3c11_23500 Physcomitrium patens
Pp3c25_13780 Physcomitrium patens
Pp3c7_2020 Physcomitrium patens
PRCOL_00004919 Prasinoderma coloniale
Prupe.1G457700 Prunus persica
Psat5g023880 Pisum sativum
PSO782G2746 Papaver somniferum
QL12p025620 Quercus lobata
RcHm_v2.0_Chr6g0305211 Rosa chinensis
RhsimUnG0021400 Rhododendron simsii
Sabra06G0210400 Salix brachista
Sabra18G0016200 Salix brachista
SalBow8G3105 Salvia bowleyana
SalBow8G4770 Salvia bowleyana
Sc07g0007350 Simmondsia chinensis
Sed0016029 Sechium edule
Sed0025542 Sechium edule
SEGI_12356 Sequoiadendron giganteum
SGA_v2.0_scaffold103G29989 Striga asiatica
SGA_v2.0_scaffold121G33027 Striga asiatica
SMO351G0409 Selaginella moellendorffii
Solyc12g096340.2 Solanum lycopersicum
Sopen12g032200 Solanum pennellii
Sp7g29430 Schrenkiella parvula
TAR383G0135 Trochodendron aralioides
THA.LOC104803627 Tarenaya hassleriana
Thecc.09G009400 Theobroma cacao
Thhalv10025721m.g Eutrema salsugineum
TPR.G12351 Trifolium pratense
TWI32G0478 Tripterygium wilfordii
TWI63G0193 Tripterygium wilfordii
unitig_0.g2188 Utricularia gibba
unitig_747.g21383 Utricularia gibba
vmacro07596 Vaccinium macrocarpon
VMungo1309G2577 Vigna mungo
Zm00001eb163870 Zea mays
Zm00001eb374350 Zea mays
Zm00001eb391110 Zea mays
Zm00001eb422880 Zea mays

User provided reference genes

Program Settings