Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18840 Brassica napus
A03p57370 Brassica napus
Aa31LG9G8200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.936 Anthoceros agrestis
Actinidia08761 Actinidia chinensis
Actinidia34326 Actinidia chinensis
Ah.13g072360 Amaranthus hybridus
AL7G25120 Arabidopsis lyrata
Aqoxy3G02310 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14ZLQ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Q7Z1Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5X75G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5BHID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM2X2W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SAF13J Arachis hypogaea
AT4G27600 Arabidopsis thaliana
ATR0057G079 Amborella trichopoda
Atru.chr12.1903 Acer truncatum
Atru.chr12.1911 Acer truncatum
AUR62002085 Chenopodium quinoa
AUR62028203 Chenopodium quinoa
BcaB01g00782 Brassica carinata
BcaB03g12539 Brassica carinata
BcaC06g32679 Brassica carinata
BcaC09g50576 Brassica carinata
BcaNung01655 Brassica carinata
BolC1t02328H Brassica oleracea
BolC7t46037H Brassica oleracea
BraA01t01827Z Brassica rapa
BraA03t14803Z Brassica rapa
C01p23770 Brassica napus
C07p55580 Brassica napus
CAN.G1131.33 Capsicum annuum
CANSAT21G1837 Cannabis sativa
CANSAT35G0373 Cannabis sativa
CARHR235300 Cardamine hirsuta
Carub.0007s1325 Capsella rubella
Ca_18951_v3 Cicer arietinum L.
Cc02_g00150 Coffea canephora
CDE11G0223 Ceratophyllum demersum
Cfa016068 Carpinus fangiana
Ciclev10031395m.g Citrus clementina
CiPaw.05G214500 Carya illinoinensis
ClCG09G013140 Citrullus lanatus
COL.COLO4_15169 Corchorus olitorius
Cpa.g.c31592 Carica papaya
Cpa.g.sc506.1 Carica papaya
Cre03.g185850 Chlamydomonas reinhardtii
CsaV3_3G050100 Cucumis sativus L.
CSS0011721 Camellia sinensis var. sinensis
CSS0040571 Camellia sinensis var. sinensis
DCAR_010527 Daucus carota
Dinv29134 Davidia involucrata
Duzib128G1201 Durio zibethinus
Duzib177G0052 Durio zibethinus
ECA233G4936 Erigeron canadensis
EL10Ac3g05052 Beta vulgaris
Eucgr.A02987 Eucalyptus grandis
FAN01G0917 Fragaria x ananassa
FAN03G2098 Fragaria x ananassa
FAN10G0627 Fragaria x ananassa
FvH4_7g34180 Fragaria vesca
Glyma.11G108900 Glycine max
Glyma.12G016500 Glycine max
Gohir.A02G127100 Gossypium hirsutum
Gohir.D03G053900 Gossypium hirsutum
Gorai.003G056400 Gossypium raimondii
GSVIVG01024341001 Vitis vinifera
HanXRQChr17g0560551 Helianthus annuus
Haze_00381 Corylus avellana
Hma1.2p1_0259F.1_g104270 Hydrangea macrophylla
Hma1.2p1_0312F.1_g121410 Hydrangea macrophylla
Hma1.2p1_0649F.1_g195200 Hydrangea macrophylla
HPP92_002586 Vanilla planifolia
Hund09806 Selenicereus undatus
Lalb_Chr19g0140021 Lupinus albus
Lj3A885T47 Lonicera japonica
Lj3g0017647 Lotus japonicus
Lsat_1_v5_gn_8_142440 Lactuca sativa
Manes.09G128800 Manihot esculenta
Mapoly0014s0025 Marchantia polymorpha
MBI04_g22924_MAGBIO Magnolia biondii
MD07G1310500 Malus domestica
Medtr4g078150 Medicago truncatula
MELO3C003308.2 Cucumis melo
Migut.H00007 Erythranthe guttata
MSTRG.8568 Avicennia marina
Nitab4.5_0000021g0780 Nicotiana tabacum
Nitab4.5_0004530g0040 Nicotiana tabacum
Nn1g00138 Nelumbo nucifera
Nn6g33561 Nelumbo nucifera
Os10g0573000 Oryza sativa ssp. japonica
Peaxi162Scf00516g00670 Petunia axillaris
PGR042G2551 Punica granatum
PGSC0003DMG400026470 Solanum tuberosum
Phvul.011G018700 Phaseolus vulgaris
Potri.013G078600 Populus trichocarpa
Pp3c14_24300 Physcomitrium patens
Pp3c17_23450 Physcomitrium patens
Pp3c2_520 Physcomitrium patens
Prupe.2G328500 Prunus persica
Psat7g170000 Pisum sativum
PSO063G3404 Papaver somniferum
PSO782G2449 Papaver somniferum
QL09p021166 Quercus lobata
RcHm_v2.0_Chr1g0384531 Rosa chinensis
Rhsim03G0223500 Rhododendron simsii
Sc13g0010940 Simmondsia chinensis
Sed0010720 Sechium edule
Sed0018021 Sechium edule
SEGI_27900 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13939 Striga asiatica
SGA_v2.0_scaffold70G23507 Striga asiatica
SMO139G0077 Selaginella moellendorffii
Solyc03g097210.3 Solanum lycopersicum
Sopen03g027970 Solanum pennellii
Sp7g25550 Schrenkiella parvula
TAR375G0677 Trochodendron aralioides
TAR636G3625 Trochodendron aralioides
THA.LOC104821716 Tarenaya hassleriana
THA.LOC104823799 Tarenaya hassleriana
Thecc.05G221400 Theobroma cacao
Thhalv10025109m.g Eutrema salsugineum
TPR.G28026 Trifolium pratense
TWI34G1340 Tripterygium wilfordii
unitig_747.g21710 Utricularia gibba
vmacro06384 Vaccinium macrocarpon
VMungo1127G1084 Vigna mungo
Zm00001eb024550 Zea mays

User provided reference genes

Program Settings