Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p30900 Brassica napus
A09p08560 Brassica napus
Aa31LG1G17750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis
Actinidia00265 Actinidia chinensis
Actinidia23993 Actinidia chinensis
AL8G41450 Arabidopsis lyrata
Aqoxy3G03670 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea
AT5G64180 Arabidopsis thaliana
ATR0177G010 Amborella trichopoda
Atru.chr12.1730 Acer truncatum
AUR62013116 Chenopodium quinoa
BcaB02g09779 Brassica carinata
BcaC01g02675 Brassica carinata
BolC3t18468H Brassica oleracea
BolC9t53879H Brassica oleracea
BraA06t26029Z Brassica rapa
BraA09t36505Z Brassica rapa
C03p62070 Brassica napus
C09p09680 Brassica napus
CAN.G523.74 Capsicum annuum
CANSAT11G1086 Cannabis sativa
CARHR278090 Cardamine hirsuta
Carub.0008s2497 Capsella rubella
Ca_18349_v3 Cicer arietinum L.
CBR_g70737 Chara braunii
Cc02_g21600 Coffea canephora
CDE04G2984 Ceratophyllum demersum
CDE04G3544 Ceratophyllum demersum
CDE07G1246 Ceratophyllum demersum
CDE07G1624 Ceratophyllum demersum
Cfa005604 Carpinus fangiana
Ciclev10029442m.g Citrus clementina
CiPaw.05G036100 Carya illinoinensis
ClCG09G015360 Citrullus lanatus
COL.COLO4_13985 Corchorus olitorius
Cpa.g.sc42.64 Carica papaya
Cre03.g170500 Chlamydomonas reinhardtii
CsaV3_7G006450 Cucumis sativus L.
CSS0044873 Camellia sinensis var. sinensis
DCAR_001788 Daucus carota
Dinv09035 Davidia involucrata
Duzib132G0386 Durio zibethinus
ECA234G1571 Erigeron canadensis
ECA236G0554 Erigeron canadensis
EL10Ac9g21470 Beta vulgaris
Eucgr.I02667 Eucalyptus grandis
FAN19G1889 Fragaria x ananassa
FAN23G0154 Fragaria x ananassa
FAN23G2587 Fragaria x ananassa
FAN26G2610 Fragaria x ananassa
FAN28G0148 Fragaria x ananassa
FvH4_1g26050 Fragaria vesca
Glyma.05G117900 Glycine max
Glyma.08G072800 Glycine max
Gohir.A12G014900 Gossypium hirsutum
Gohir.D12G015300 Gossypium hirsutum
Gorai.008G015400 Gossypium raimondii
GSVIVG01003100001 Vitis vinifera
HanXRQChr10g0295861 Helianthus annuus
Haze_10694 Corylus avellana
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla
HPP92_024935 Vanilla planifolia
Hund06386 Selenicereus undatus
Lalb_Chr10g0097811 Lupinus albus
Lj4g0015467 Lotus japonicus
Lj5P240T24 Lonicera japonica
Lj6g0024224 Lotus japonicus
Lsat_1_v5_gn_5_107281 Lactuca sativa
Manes.14G166201 Manihot esculenta
Mapoly0094s0011 Marchantia polymorpha
MD00G1096800 Malus domestica
MD05G1163000 Malus domestica
MD05G1163200 Malus domestica
MD10G1152800 Malus domestica
Medtr4g094242 Medicago truncatula
MELO3C018647.2 Cucumis melo
Migut.B00613 Erythranthe guttata
MSTRG.16580 Avicennia marina
MSTRG.20298 Avicennia marina
Nitab4.5_0002576g0040 Nicotiana tabacum
Nitab4.5_0003858g0050 Nicotiana tabacum
Nn4g23459 Nelumbo nucifera
Oeu047362.1 Olea europaea
Os12g0502100 Oryza sativa ssp. japonica
Peaxi162Scf00001g00019 Petunia axillaris
PGR142G0837 Punica granatum
PGSC0003DMG400012586 Solanum tuberosum
Phvul.002G208400 Phaseolus vulgaris
Potri.012G022200 Populus trichocarpa
Potri.015G005600 Populus trichocarpa
Pp3c24_330 Physcomitrium patens
Prupe.8G061800 Prunus persica
Psat7g098400 Pisum sativum
PSO017G6730 Papaver somniferum
PSO478G0074 Papaver somniferum
QL11p020678 Quercus lobata
RcHm_v2.0_Chr3g0485521 Rosa chinensis
Rhsim05G0107700 Rhododendron simsii
Sabra05G0140100 Salix brachista
Sabra15G0004000 Salix brachista
SalBow6G1080 Salvia bowleyana
SalBow6G1732 Salvia bowleyana
Sc18g0006920 Simmondsia chinensis
Sed0024565 Sechium edule
SGA_v2.0_scaffold11G05811 Striga asiatica
SGA_v2.0_scaffold14G07119 Striga asiatica
SHI16526 Sapria himalayana
SMO116G0092 Selaginella moellendorffii
Solyc01g105130.4 Solanum lycopersicum
Sopen01g047660 Solanum pennellii
Sp2g27240 Schrenkiella parvula
TAR622G1105 Trochodendron aralioides
THA.LOC104799966 Tarenaya hassleriana
Thecc.02G139200 Theobroma cacao
Thhalv10005060m.g Eutrema salsugineum
TPR.G10469 Trifolium pratense
TWI14G1282 Tripterygium wilfordii
TWI14G1433 Tripterygium wilfordii
unitig_8.g3487 Utricularia gibba
vmacro19927 Vaccinium macrocarpon
VMungo0251G3203 Vigna mungo
VMungo0540G0821 Vigna mungo
Zm00001eb138120 Zea mays
Zm00001eb409430 Zea mays

User provided reference genes

Program Settings