Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG7G14860 Aethionema arabicum
Ah.01g019280 Amaranthus hybridus
AL4G10820 Arabidopsis lyrata
Aqoxy5G01600 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HK2K9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KZ2IY9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VMSS78 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZ83MM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XF6DSS Arachis hypogaea
AT2G21620 Arabidopsis thaliana
ATR0568G175 Amborella trichopoda
Atru.chr5.3034 Acer truncatum
AUR62011306 Chenopodium quinoa
AUR62016751 Chenopodium quinoa
BcaB08g34988 Brassica carinata
BcaC07g41131 Brassica carinata
CAN.G1412.17 Capsicum annuum
CANSAT35G0650 Cannabis sativa
CARHR112610 Cardamine hirsuta
Carub.0004s0065 Capsella rubella
Ca_15362_v3 Cicer arietinum L.
Cc02_g17430 Coffea canephora
CDE05G0028 Ceratophyllum demersum
CDE05G2374 Ceratophyllum demersum
CDE11G1056 Ceratophyllum demersum
Cfa004987 Carpinus fangiana
Ciclev10029371m.g Citrus clementina
CiPaw.05G065900 Carya illinoinensis
CiPaw.06G134600 Carya illinoinensis
ClCG11G004360 Citrullus lanatus
COL.COLO4_25946 Corchorus olitorius
Cpa.g.sc62.161 Carica papaya
Cre16.g649650 Chlamydomonas reinhardtii
CsaV3_2G014760 Cucumis sativus L.
CSS0017185 Camellia sinensis var. sinensis
CSS0043812 Camellia sinensis var. sinensis
DCAR_001571 Daucus carota
DCAR_022980 Daucus carota
DCAR_028978 Daucus carota
Dinv01868 Davidia involucrata
Dinv04691 Davidia involucrata
Dinv42054 Davidia involucrata
Duzib052G0490 Durio zibethinus
Duzib132G0028 Durio zibethinus
ECA234G4498 Erigeron canadensis
ECA240G2632 Erigeron canadensis
EL10Ac9g20870 Beta vulgaris
EL10Ac9g21712 Beta vulgaris
Eucgr.G01684 Eucalyptus grandis
FAN15G1568 Fragaria x ananassa
FAN27G0970 Fragaria x ananassa
FvH4_2g09040 Fragaria vesca
Glyma.04G012400 Glycine max
Gohir.A04G127801 Gossypium hirsutum
Gohir.A12G029500 Gossypium hirsutum
Gohir.D04G167000 Gossypium hirsutum
Gohir.D12G028800 Gossypium hirsutum
Gorai.008G029500 Gossypium raimondii
Gorai.012G155300 Gossypium raimondii
GSVIVG01023785001 Vitis vinifera
HanXRQChr09g0248171 Helianthus annuus
HanXRQChr12g0376151 Helianthus annuus
Haze_02402 Corylus avellana
Hma1.2p1_2192F.1_g316750 Hydrangea macrophylla
Hma1.2p1_2496F.1_g323328 Hydrangea macrophylla
HPP92_004901 Vanilla planifolia
HPP92_008313 Vanilla planifolia
Hund00258 Selenicereus undatus
Hund06240 Selenicereus undatus
Lalb_Chr23g0265361 Lupinus albus
Lj1g0002606 Lotus japonicus
Lj9A374T110 Lonicera japonica
Lsat_1_v5_gn_5_119101 Lactuca sativa
Manes.11G086500 Manihot esculenta
Mapoly0117s0006 Marchantia polymorpha
MBI16_g07736_MAGBIO Magnolia biondii
MD05G1064900 Malus domestica
MD05G1065000 Malus domestica
MD10G1073900 Malus domestica
Medtr3g116830 Medicago truncatula
MELO3C023300.2 Cucumis melo
Migut.B00227 Erythranthe guttata
MSTRG.20075 Avicennia marina
Nitab4.5_0000308g0240 Nicotiana tabacum
Nitab4.5_0000336g0020 Nicotiana tabacum
Nitab4.5_0002241g0040 Nicotiana tabacum
Nn1g04950 Nelumbo nucifera
Nn5g29641 Nelumbo nucifera
Oeu020748.1 Olea europaea
Oeu029140.1 Olea europaea
Oeu029148.1 Olea europaea
Oeu061211.1 Olea europaea
Os02g0705400 Oryza sativa ssp. japonica
Peaxi162Scf00684g00228 Petunia axillaris
PGR042G1835 Punica granatum
PGSC0003DMG400000731 Solanum tuberosum
Phvul.009G023400 Phaseolus vulgaris
Potri.004G156100 Populus trichocarpa
Potri.004G156200 Populus trichocarpa
Potri.009G117500 Populus trichocarpa
Pp3c13_4400 Physcomitrium patens
Prupe.8G095600 Prunus persica
Psat5g004200 Pisum sativum
PSO675G7009 Papaver somniferum
QL11p044699 Quercus lobata
QL11p044722 Quercus lobata
RcHm_v2.0_Chr6g0264711 Rosa chinensis
Rhsim11G0178600 Rhododendron simsii
Sabra04G0104100 Salix brachista
Sabra04G0104200 Salix brachista
Sabra09G0090100 Salix brachista
SalBow6G0500 Salvia bowleyana
Sc18g0004420 Simmondsia chinensis
Sed0010470 Sechium edule
SEGI_06830 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13170 Striga asiatica
Solyc01g109710.3 Solanum lycopersicum
Sopen01g051900 Solanum pennellii
Sp4g00780 Schrenkiella parvula
TAR381G1268 Trochodendron aralioides
THA.LOC104824819 Tarenaya hassleriana
Thecc.02G083700 Theobroma cacao
Thhalv10000338m.g Eutrema salsugineum
TPR.G38099 Trifolium pratense
TWI79G1412 Tripterygium wilfordii
unitig_0.g63 Utricularia gibba
vmacro02093 Vaccinium macrocarpon
VMungo1309G1281 Vigna mungo
Zm00001eb252090 Zea mays

User provided reference genes

Program Settings