Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18670 Brassica napus
Aa31LG5G4150 Aethionema arabicum
Actinidia32965 Actinidia chinensis
Actinidia35935 Actinidia chinensis
Actinidia37388 Actinidia chinensis
Ah.13g074940 Amaranthus hybridus
AL4G28890 Arabidopsis lyrata
Aqoxy2G03758 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea
AT2G33255 Arabidopsis thaliana
ATR0787G199 Amborella trichopoda
Atru.chr4.1882 Acer truncatum
AUR62035886 Chenopodium quinoa
AUR62035887 Chenopodium quinoa
BcaB06g28663 Brassica carinata
BcaC01g05849 Brassica carinata
BcaC02g07846 Brassica carinata
BcaC02g07849 Brassica carinata
BolC3t14563H Brassica oleracea
BolC4t27754H Brassica oleracea
BraA03t11126Z Brassica rapa
BraA04t18060Z Brassica rapa
C03p21810 Brassica napus
C04p62700 Brassica napus
C09p23060 Brassica napus
CAN.G812.29 Capsicum annuum
CANSAT78G1287 Cannabis sativa
CARHR127260 Cardamine hirsuta
Carub.0004s1472 Capsella rubella
Ca_09794_v3 Cicer arietinum L.
Cc03_g06750 Coffea canephora
CDE01G0085 Ceratophyllum demersum
CDE02G2305 Ceratophyllum demersum
Cfa014810 Carpinus fangiana
Ciclev10005577m.g Citrus clementina
CiPaw.01G175800 Carya illinoinensis
ClCG05G003860 Citrullus lanatus
COL.COLO4_15996 Corchorus olitorius
Cpa.g.sc3.348 Carica papaya
Cre01.g025100 Chlamydomonas reinhardtii
Cre03.g193000 Chlamydomonas reinhardtii
CsaV3_3G011540 Cucumis sativus L.
CSS0040589 Camellia sinensis var. sinensis
DCAR_002295 Daucus carota
Dinv27131 Davidia involucrata
Duzib151G0563 Durio zibethinus
Duzib212G0768 Durio zibethinus
ECA248G1656 Erigeron canadensis
EL10Ac3g06713 Beta vulgaris
Eucgr.H02890 Eucalyptus grandis
FAN12G3888 Fragaria x ananassa
FAN17G0987 Fragaria x ananassa
FAN22G1742 Fragaria x ananassa
FvH4_4g05140 Fragaria vesca
Glyma.10G191200 Glycine max
Glyma.20G199100 Glycine max
Gohir.A10G106500 Gossypium hirsutum
Gohir.D10G160700 Gossypium hirsutum
Gorai.011G180400 Gossypium raimondii
GSVIVG01027954001 Vitis vinifera
HanXRQChr01g0022501 Helianthus annuus
Haze_11491 Corylus avellana
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla
HPP92_007421 Vanilla planifolia
Hund20478 Selenicereus undatus
Lalb_Chr02g0150741 Lupinus albus
Lj5g0004239 Lotus japonicus
Lj5g0006737 Lotus japonicus
Lj5g0009281 Lotus japonicus
Lj6C638T14 Lonicera japonica
LjContig00022g0011299 Lotus japonicus
Lju2262C0T14 Lonicera japonica
Lsat_1_v5_gn_1_76101 Lactuca sativa
Manes.15G047200 Manihot esculenta
MBI07_g08907_MAGBIO Magnolia biondii
MCO11G090 Micromonas commoda
MD16G1230400 Malus domestica
Medtr1g073140 Medicago truncatula
MELO3C006364.2 Cucumis melo
Migut.N00320 Erythranthe guttata
MSTRG.24647 Avicennia marina
Nitab4.5_0002937g0030 Nicotiana tabacum
Nitab4.5_0003474g0030 Nicotiana tabacum
Nn3g19816 Nelumbo nucifera
Oeu023143.1 Olea europaea
Oeu055271.1 Olea europaea
Os02g0816100 Oryza sativa ssp. japonica
Peaxi162Scf00125g01318 Petunia axillaris
PGR004G1196 Punica granatum
PGSC0003DMG400001560 Solanum tuberosum
Phvul.L001872 Phaseolus vulgaris
Potri.010G063700 Populus trichocarpa
Pp3c17_6550 Physcomitrium patens
Pp3c2_6750 Physcomitrium patens
Prupe.1G052300 Prunus persica
Psat6g138760 Pisum sativum
PSO063G0276 Papaver somniferum
QL06p021877 Quercus lobata
RcHm_v2.0_Chr4g0396071 Rosa chinensis
Rhsim09G0042400 Rhododendron simsii
Rhsim09G0043000 Rhododendron simsii
Sabra10G0043200 Salix brachista
SalBow3G4628 Salvia bowleyana
Sc04g0004680 Simmondsia chinensis
Sed0003799 Sechium edule
Sed0011773 Sechium edule
SEGI_12787 Sequoiadendron giganteum
SEGI_32209 Sequoiadendron giganteum
SGA_v2.0_scaffold285G47059 Striga asiatica
SGA_v2.0_scaffold31G12610 Striga asiatica
SGA_v2.0_scaffold31G12618 Striga asiatica
SMO115G0208 Selaginella moellendorffii
SMO165G0032 Selaginella moellendorffii
Solyc09g090750.3 Solanum lycopersicum
Sopen09g033690 Solanum pennellii
Sp4g15560 Schrenkiella parvula
TAR365G0649 Trochodendron aralioides
THA.LOC104816010 Tarenaya hassleriana
Thecc.04G268500 Theobroma cacao
Thhalv10017161m.g Eutrema salsugineum
TPR.G18563 Trifolium pratense
TWI09G0038 Tripterygium wilfordii
unitig_899.g15552 Utricularia gibba
vmacro00537 Vaccinium macrocarpon
VMungo0720G0761 Vigna mungo
Zm00001eb191500 Zea mays

User provided reference genes

Program Settings