Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07870 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis
Actinidia38346 Actinidia chinensis
Ah.04g162170 Amaranthus hybridus
AL8G34300 Arabidopsis lyrata
Aqoxy1G03917 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea
AT5G58200 Arabidopsis thaliana
ATR0184G013 Amborella trichopoda
AUR62002687 Chenopodium quinoa
AUR62017200 Chenopodium quinoa
BcaB05g22408 Brassica carinata
BcaC03g14112 Brassica carinata
BolC2t07463H Brassica oleracea
BraA02t05860Z Brassica rapa
C02p13510 Brassica napus
CAN.G520.14 Capsicum annuum
CARHR032820 Cardamine hirsuta
CARHR272000 Cardamine hirsuta
Carub.0008s1874 Capsella rubella
Ca_21103_v3 Cicer arietinum L.
Cc06_g15390 Coffea canephora
CDE05G0292 Ceratophyllum demersum
Ciclev10008799m.g Citrus clementina
CiPaw.16G115700 Carya illinoinensis
ClCG11G003570 Citrullus lanatus
COL.COLO4_18762 Corchorus olitorius
Cpa.g.sc46.115 Carica papaya
Cre17.g729650 Chlamydomonas reinhardtii
CsaV3_2G003440 Cucumis sativus L.
CSS0018805 Camellia sinensis var. sinensis
CSS0025720 Camellia sinensis var. sinensis
DCAR_019366 Daucus carota
Dinv42894 Davidia involucrata
Dinv43207 Davidia involucrata
Duzib168G0440 Durio zibethinus
EL10Ac8g18846 Beta vulgaris
Eucgr.C00382 Eucalyptus grandis
FAN19G0239 Fragaria x ananassa
FAN19G2321 Fragaria x ananassa
FAN23G2003 Fragaria x ananassa
FAN26G1951 Fragaria x ananassa
FAN28G1911 Fragaria x ananassa
FvH4_1g01320 Fragaria vesca
FvH4_1g01360 Fragaria vesca
FvH4_1g01380 Fragaria vesca
FvH4_1g01381 Fragaria vesca
Glyma.13G155700 Glycine max
Gohir.A05G050600 Gossypium hirsutum
Gohir.D05G052200 Gossypium hirsutum
Gorai.009G054000 Gossypium raimondii
GSVIVG01001075001 Vitis vinifera
GSVIVG01003719001 Vitis vinifera
HanXRQChr10g0314551 Helianthus annuus
Haze_19246 Corylus avellana
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla
HPP92_017513 Vanilla planifolia
Hund21620 Selenicereus undatus
Lalb_Chr12g0198561 Lupinus albus
Lj4g0021784 Lotus japonicus
Lj7A453G70 Lonicera japonica
Lsat_1_v5_gn_5_90820 Lactuca sativa
Manes.06G038100 Manihot esculenta
Mapoly0124s0018 Marchantia polymorpha
MBI15_g30906_MAGBIO Magnolia biondii
MD00G1188300 Malus domestica
MD00G1188400 Malus domestica
MD02G1011000 Malus domestica
MD15G1156000 Malus domestica
Medtr4g015670 Medicago truncatula
Medtr4g131670 Medicago truncatula
MELO3C004453.2 Cucumis melo
Migut.K00351 Erythranthe guttata
Migut.K01256 Erythranthe guttata
MSTRG.26302 Avicennia marina
Nitab4.5_0001094g0060 Nicotiana tabacum
Nitab4.5_0003856g0050 Nicotiana tabacum
Nn2g12295 Nelumbo nucifera
Oeu028814.1 Olea europaea
Oeu043492.1 Olea europaea
Os06g0182400 Oryza sativa ssp. japonica
Peaxi162Scf00347g00517 Petunia axillaris
PGR142G1207 Punica granatum
PGR142G2956 Punica granatum
PGSC0003DMG400003198 Solanum tuberosum
Phvul.003G158400 Phaseolus vulgaris
Potri.006G188200 Populus trichocarpa
Potri.018G111500 Populus trichocarpa
Pp3c26_6540 Physcomitrium patens
Prupe.7G259100 Prunus persica
Psat4g007440 Pisum sativum
PSO339G6042 Papaver somniferum
PSO384G3563 Papaver somniferum
PSO384G4708 Papaver somniferum
QL02p092408 Quercus lobata
QL02p092448 Quercus lobata
RcHm_v2.0_Chr2g0086151 Rosa chinensis
Rhsim01G0042700 Rhododendron simsii
Rhsim01G0046600 Rhododendron simsii
Sabra06G0143900 Salix brachista
Sabra06G0145100 Salix brachista
Sc04g0006660 Simmondsia chinensis
Sc08g0005240 Simmondsia chinensis
Sc14g0000030 Simmondsia chinensis
Sed0008154 Sechium edule
SEGI_04227 Sequoiadendron giganteum
SGA_v2.0_scaffold387G50519 Striga asiatica
SMO169G0164 Selaginella moellendorffii
SMO347G0290 Selaginella moellendorffii
SMO356G0211 Selaginella moellendorffii
SMO356G0422 Selaginella moellendorffii
Solyc07g005120.3 Solanum lycopersicum
Sopen07g001260 Solanum pennellii
Sp6g19860 Schrenkiella parvula
TAR383G0013 Trochodendron aralioides
TAR383G0486 Trochodendron aralioides
THA.LOC104811841 Tarenaya hassleriana
Thecc.09G035000 Theobroma cacao
Thhalv10014084m.g Eutrema salsugineum
TPR.G37046 Trifolium pratense
TPR.G6509 Trifolium pratense
TWI32G1323 Tripterygium wilfordii
unitig_899.g15450 Utricularia gibba
vmacro13046 Vaccinium macrocarpon
vmacro23231 Vaccinium macrocarpon
VMungo1215G1041 Vigna mungo
Zm00001eb374780 Zea mays

User provided reference genes

Program Settings