Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17160 Brassica napus
A07p15290 Brassica napus
Aa31LG7G5240 Aethionema arabicum
Actinidia04761 Actinidia chinensis
Actinidia29533 Actinidia chinensis
Ah.05g167920 Amaranthus hybridus
AL1G34140 Arabidopsis lyrata
Aqoxy5G02075 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea
AT1G21090 Arabidopsis thaliana
Atru.chr13.2098 Acer truncatum
AUR62013592 Chenopodium quinoa
AUR62026702 Chenopodium quinoa
AUR62044379 Chenopodium quinoa
BcaB03g14281 Brassica carinata
BcaB07g32102 Brassica carinata
BcaC05g26017 Brassica carinata
BcaC06g34887 Brassica carinata
BolC5t30681H Brassica oleracea
BolC7t42748H Brassica oleracea
BraA06t24819Z Brassica rapa
BraA07t29267Z Brassica rapa
C05p19820 Brassica napus
C07p22470 Brassica napus
CAN.G268.27 Capsicum annuum
CANSAT25G1414 Cannabis sativa
CARHR021560 Cardamine hirsuta
Carub.0001s2055 Capsella rubella
Ca_10677_v3 Cicer arietinum L.
Cc10_g14430 Coffea canephora
CDE08G0602 Ceratophyllum demersum
Cfa018318 Carpinus fangiana
Ciclev10002306m.g Citrus clementina
CiPaw.15G015800 Carya illinoinensis
ClCG08G007050 Citrullus lanatus
COL.COLO4_04528 Corchorus olitorius
Cpa.g.sc21.206 Carica papaya
CsaV3_6G005160 Cucumis sativus L.
CSS0023884 Camellia sinensis var. sinensis
DCAR_001140 Daucus carota
Dinv25871 Davidia involucrata
Dinv41078 Davidia involucrata
Duzib041G0750 Durio zibethinus
Duzib093G0584 Durio zibethinus
Duzib116G0486 Durio zibethinus
ECA246G2194 Erigeron canadensis
EL10Ac1g01556 Beta vulgaris
Eucgr.F04235 Eucalyptus grandis
FAN15G1313 Fragaria x ananassa
FAN20G0746 Fragaria x ananassa
FAN24G0867 Fragaria x ananassa
FAN27G2560 Fragaria x ananassa
FvH4_2g13650 Fragaria vesca
Glyma.10G223700 Glycine max
Glyma.16G166000 Glycine max
Glyma.20G168200 Glycine max
Gohir.A02G063800 Gossypium hirsutum
Gohir.A05G243900 Gossypium hirsutum
Gohir.D02G069400 Gossypium hirsutum
Gohir.D05G244900 Gossypium hirsutum
Gorai.005G078700 Gossypium raimondii
Gorai.009G254700 Gossypium raimondii
GSVIVG01026618001 Vitis vinifera
GSVIVG01034539001 Vitis vinifera
HanXRQChr05g0161971 Helianthus annuus
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla
HPP92_004418 Vanilla planifolia
HPP92_019356 Vanilla planifolia
Hund17438 Selenicereus undatus
Hund26694 Selenicereus undatus
Lalb_Chr06g0161651 Lupinus albus
Lj5g0026688 Lotus japonicus
Lj7C374T8 Lonicera japonica
Lsat_1_v5_gn_6_100560 Lactuca sativa
Manes.02G180000 Manihot esculenta
Manes.18G092600 Manihot esculenta
MBI09_g40713_MAGBIO Magnolia biondii
MD05G1026900 Malus domestica
MD10G1026200 Malus domestica
Medtr1g098580 Medicago truncatula
MELO3C008336.2 Cucumis melo
Migut.C00998 Erythranthe guttata
MSTRG.1087 Avicennia marina
Nitab4.5_0001062g0090 Nicotiana tabacum
Nitab4.5_0002487g0030 Nicotiana tabacum
Nitab4.5_0009071g0020 Nicotiana tabacum
Nitab4.5_0010143g0010 Nicotiana tabacum
Nn1g02131 Nelumbo nucifera
Nn1g06074 Nelumbo nucifera
Nn5g28758 Nelumbo nucifera
Oeu016600.1 Olea europaea
Oeu046040.1 Olea europaea
Peaxi162Scf00599g00048 Petunia axillaris
Peaxi162Scf01294g00115 Petunia axillaris
PGR044G2378 Punica granatum
PGR080G0005 Punica granatum
PGR100G0011 Punica granatum
PGSC0003DMG400024091 Solanum tuberosum
Phvul.004G093600 Phaseolus vulgaris
Phvul.007G081100 Phaseolus vulgaris
Potri.002G067600 Populus trichocarpa
Potri.005G192800 Populus trichocarpa
Prupe.8G031400 Prunus persica
Psat6g192320 Pisum sativum
PSO210G3290 Papaver somniferum
PSO447G0272 Papaver somniferum
QL02p039028 Quercus lobata
RcHm_v2.0_Chr6g0275291 Rosa chinensis
Rhsim11G0083500 Rhododendron simsii
Sc02g0004030 Simmondsia chinensis
Sed0009804 Sechium edule
Sed0016357 Sechium edule
Solyc04g071500.4 Solanum lycopersicum
Sopen04g027470 Solanum pennellii
Sp1g18760 Schrenkiella parvula
TAR381G1121 Trochodendron aralioides
TAR628G1632 Trochodendron aralioides
THA.LOC104812035 Tarenaya hassleriana
THA.LOC104813720 Tarenaya hassleriana
Thecc.08G153600 Theobroma cacao
Thhalv10008611m.g Eutrema salsugineum
TPR.G17045 Trifolium pratense
TWI34G1794 Tripterygium wilfordii
TWI60G0448 Tripterygium wilfordii
unitig_748.g7705 Utricularia gibba
vmacro01457 Vaccinium macrocarpon
VMungo0464G0684 Vigna mungo
VMungo0720G2232 Vigna mungo

User provided reference genes

Program Settings